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Report for CCDS69482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69482.1 Public Homo sapiens 8 RGS20 24 110 108 CCDS HistoryNCBI Gene:8601Re-query CCDS DB by CCDS ID:69482.1Re-query CCDS DB by GeneID:8601See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344277.10 ENSP00000344630.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344277.10Link to Ensembl Protein Viewer:ENSP00000344630.6Re-query CCDS DB by Nucleotide ID:ENST00000344277Re-query CCDS DB by Protein ID:ENSP00000344630
Original member Current member NCBI NM_001286673.2 NP_001273602.1 Accepted alive Link to Nucleotide Sequence:NM_001286673.2Link to Protein Sequence:NP_001273602.1Re-query CCDS DB by Nucleotide ID:NM_001286673Re-query CCDS DB by Protein ID:NP_001273602Link to BLAST:NP_001273602.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273602.1 273 O76081-2 273 100% 0 0

Chromosomal Locations for CCDS 69482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 53851900 53852064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 53939576 53939724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 53946665 53946748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 53954076 53954310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 53958270 53958458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGCCCCAGCTTTCCCAAGATAACCAAGAGTGCCTCCAGAAACATTTCTCCAGGCCGTCTATATGGACAC
AGTTTCTGCCCCTGTTCAGGGCTCAGAGATATAATACAGACATTCACCAAATCACAGAAAATGAAGGAGA
CCTCAGGGCTGTTCCTGATATCAAGCAGATGGGATCAGAGCGGATGGAGATGCGGAAGCGGCAGATGCCC
GCCGCCCAGGACACACCAGGCGCCGCCCCAGGCCAGCCCGGAGCGGGGAGTCGCGGGTCCAACGCATGCT
GCTTCTGCTGGTGCTGCTGTTGTAGCTGCTCGTGTCTCACTGTTAGAAACCAGGAAGATCAGAGGCCCAC
AATAGCTTCCCACGAACTCAGAGCAGATCTTCCAACCTGGGAAGAAAGCCCTGCTCCTACTCTGGAAGAA
GTCAACGCCTGGGCTCAGTCATTTGACAAATTAATGGTCACTCCAGCAGGAAGGAATGCATTCCGTGAAT
TCCTCCGAACAGAATTCAGTGAGGAAAATATGCTCTTCTGGATGGCCTGTGAGGAACTGAAAAAGGAAGC
TAATAAAAACATTATTGAAGAGAAAGCAAGGATAATCTATGAAGACTACATTTCTATACTTTCTCCTAAG
GAGGTGAGCTTAGACTCCCGGGTGAGAGAAGTGATCAACAGAAACATGGTGGAGCCATCCCAACACATAT
TCGATGATGCTCAACTTCAGATTTACACCCTGATGCACAGAGACTCATATCCTCGATTCATGAACTCTGC
TGTCTATAAGGACTTGCTTCAGTCCTTATCGGAGAAATCTATTGAAGCATAG

Translation (273 aa):
MPQLSQDNQECLQKHFSRPSIWTQFLPLFRAQRYNTDIHQITENEGDLRAVPDIKQMGSERMEMRKRQMP
AAQDTPGAAPGQPGAGSRGSNACCFCWCCCCSCSCLTVRNQEDQRPTIASHELRADLPTWEESPAPTLEE
VNAWAQSFDKLMVTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKNIIEEKARIIYEDYISILSPK
EVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSAVYKDLLQSLSEKSIEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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