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Report for CCDS6946.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6946.1 Public Homo sapiens 9 NTNG2 24 110 108 CCDS HistoryNCBI Gene:84628Re-query CCDS DB by CCDS ID:6946.1Re-query CCDS DB by GeneID:84628See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6946.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393229.4 ENSP00000376921.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393229.4Link to Ensembl Protein Viewer:ENSP00000376921.3Re-query CCDS DB by Nucleotide ID:ENST00000393229Re-query CCDS DB by Protein ID:ENSP00000376921
Original member Current member NCBI NM_032536.4 NP_115925.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032536.4Link to Protein Sequence:NP_115925.2Re-query CCDS DB by Nucleotide ID:NM_032536Re-query CCDS DB by Protein ID:NP_115925Link to BLAST:NP_115925.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115925.2 530 Q96CW9-1 530 100% 0 0

Chromosomal Locations for CCDS 6946.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 132166832 132167044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132197966 132198609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132226849 132227021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132230572 132230595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132239104 132239271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132240910 132241044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132241876 132242111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGCTGCATCTGCTGGCGCTCTTCCTGCACTGCCTCCCTCTGGCCTCTGGGGACTATGACATCTGCAAAT
CCTGGGTGACCACAGATGAGGGCCCCACCTGGGAGTTCTACGCCTGCCAGCCCAAGGTGATGCGCCTGAA
GGACTACGTCAAGGTGAAGGTGGAGCCCTCAGGCATCACATGTGGAGACCCCCCTGAGAGGTTCTGCTCC
CATGAGAATCCCTACCTATGCAGCAACGAGTGTGACGCCTCCAACCCGGACCTGGCCCACCCGCCCAGGC
TCATGTTCGACAAGGAGGAGGAGGGCCTGGCCACCTACTGGCAGAGCATCACCTGGAGCCGCTACCCCAG
CCCGCTGGAAGCCAACATCACCCTTTCGTGGAACAAGACCGTGGAGCTGACCGACGACGTGGTGATGACC
TTCGAGTACGGCCGGCCCACGGTCATGGTCCTGGAGAAGTCCCTGGACAACGGGCGCACCTGGCAGCCCT
ACCAGTTCTACGCCGAGGACTGCATGGAGGCCTTCGGTATGTCCGCCCGCCGGGCCCGCGACATGTCATC
CTCCAGCGCGCACCGCGTGCTCTGCACCGAGGAGTACTCGCGCTGGGCAGGCTCCAAGAAGGAGAAGCAC
GTGCGCTTCGAGGTGCGGGACCGCTTCGCCATCTTTGCCGGCCCCGACCTGCGCAACATGGACAACCTCT
ACACGCGGCTGGAGAGCGCCAAGGGCCTCAAGGAGTTCTTCACCCTCACCGACCTGCGCATGCGGCTGCT
GCGCCCGGCGCTGGGCGGCACCTATGTGCAGCGGGAGAACCTCTACAAGTACTTCTACGCCATCTCCAAC
ATCGAGGTCATCGGCAGGTGCAAGTGCAACCTGCACGCCAACCTGTGCTCCATGCGCGAGGGCAGCCTGC
AGTGCGAGTGCGAGCACAACACCACCGGCCCCGACTGCGGCAAGTGCAAGAAGAATTTCCGCACCCGGTC
CTGGCGGGCCGGCTCCTACCTGCCGCTGCCCCATGGCTCTCCCAACGCCTGTGCCACTGCAGGTTCCTTT
GGCAACTGCGAATGCTACGGTCACTCCAACCGCTGCAGCTACATTGACTTCCTGAATGTGGTGACCTGCG
TCAGCTGCAAGCACAACACGCGAGGTCAGCACTGCCAGCACTGCCGGCTGGGCTACTACCGCAACGGCTC
GGCAGAGCTGGATGATGAGAACGTCTGCATTGAGTGTAACTGCAACCAGATAGGCTCCGTGCACGACCGG
TGCAACGAGACCGGCTTCTGCGAGTGCCGCGAGGGCGCGGCGGGCCCCAAGTGCGACGACTGCCTCCCCA
CGCACTACTGGCGCCAGGGCTGCTACCCCAACGTGTGCGACGACGACCAGCTGCTGTGCCAGAACGGAGG
CACCTGCCTGCAGAACCAGCGCTGCGCCTGCCCGCGCGGCTACACCGGCGTGCGCTGCGAGCAGCCCCGC
TGCGACCCCGCCGACGATGACGGCGGTCTGGACTGCGACCGCGCGCCCGGGGCCGCCCCGCGCCCCGCCA
CCCTGCTCGGCTGCCTGCTGCTGCTGGGGCTGGCCGCCCGCCTGGGCCGCTGA

Translation (530 aa):
MLHLLALFLHCLPLASGDYDICKSWVTTDEGPTWEFYACQPKVMRLKDYVKVKVEPSGITCGDPPERFCS
HENPYLCSNECDASNPDLAHPPRLMFDKEEEGLATYWQSITWSRYPSPLEANITLSWNKTVELTDDVVMT
FEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRARDMSSSSAHRVLCTEEYSRWAGSKKEKH
VRFEVRDRFAIFAGPDLRNMDNLYTRLESAKGLKEFFTLTDLRMRLLRPALGGTYVQRENLYKYFYAISN
IEVIGRCKCNLHANLCSMREGSLQCECEHNTTGPDCGKCKKNFRTRSWRAGSYLPLPHGSPNACATAGSF
GNCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDR
CNETGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDDDQLLCQNGGTCLQNQRCACPRGYTGVRCEQPR
CDPADDDGGLDCDRAPGAAPRPATLLGCLLLLGLAARLGR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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