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Report for CCDS6912.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6912.1 Public Homo sapiens 9 ENDOG 24 110 108 CCDS HistoryNCBI Gene:2021Re-query CCDS DB by CCDS ID:6912.1Re-query CCDS DB by GeneID:2021See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6912.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372642.5 ENSP00000361725.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372642.5Link to Ensembl Protein Viewer:ENSP00000361725.4Re-query CCDS DB by Nucleotide ID:ENST00000372642Re-query CCDS DB by Protein ID:ENSP00000361725
Original member Current member NCBI NM_004435.2 NP_004426.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004435.2Link to Protein Sequence:NP_004426.2Re-query CCDS DB by Nucleotide ID:NM_004435Re-query CCDS DB by Protein ID:NP_004426Link to BLAST:NP_004426.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004426.2 297 Q14249 297 100% 0 0

Chromosomal Locations for CCDS 6912.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128818685 128819185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128820739 128820848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128822328 128822610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGCGGGCGCTGCGGGCCGGCCTGACCCTGGCGTCGGGCGCGGGGCTGGGTGCGGTCGTCGAGGGCTGGC
GGCGGCGGCGGGAGGACGCGCGGGCGGCGCCGGGACTGCTGGGCCGGCTGCCCGTGCTGCCCGTGGCGGC
GGCAGCCGAGTTGCCCCCTGTGCCCGGGGGACCCCGCGGCCCGGGCGAGCTGGCCAAGTACGGGCTGCCG
GGGCTGGCGCAGCTCAAGAGCCGCGAGTCGTACGTGCTGTGCTACGACCCGCGCACCCGCGGCGCGCTCT
GGGTGGTGGAGCAGCTGCGACCCGAGCGTCTCCGCGGCGACGGCGACCGGCGCGAGTGCGACTTCCGCGA
GGACGACTCGGTGCACGCGTACCACCGTGCCACCAACGCCGACTACCGCGGCAGTGGCTTCGACCGCGGT
CACCTGGCCGCCGCCGCCAACCACCGCTGGAGCCAGAAGGCCATGGACGACACGTTCTACCTGAGCAACG
TCGCGCCCCAGGTGCCCCACCTCAACCAGAATGCCTGGAACAACCTGGAGAAATATAGCCGCAGCTTGAC
CCGCAGCTACCAAAACGTCTATGTCTGCACAGGGCCACTCTTCCTGCCCAGGACAGAGGCTGATGGGAAA
TCCTACGTAAAGTACCAGGTCATCGGCAAGAACCACGTGGCAGTGCCCACACACTTCTTCAAGGTGCTGA
TCCTGGAGGCAGCAGGTGGGCAAATTGAGCTCCGCACCTACGTGATGCCCAACGCACCTGTGGATGAGGC
CATCCCACTGGAGCGCTTCCTGGTGCCCATCGAGAGCATTGAGCGGGCTTCGGGGCTGCTCTTTGTGCCA
AACATCCTGGCGCGGGCAGGCAGCCTCAAGGCCATCACGGCGGGCAGTAAGTGA

Translation (297 aa):
MRALRAGLTLASGAGLGAVVEGWRRRREDARAAPGLLGRLPVLPVAAAAELPPVPGGPRGPGELAKYGLP
GLAQLKSRESYVLCYDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDSVHAYHRATNADYRGSGFDRG
HLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGK
SYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVP
NILARAGSLKAITAGSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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