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Report for CCDS69095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69095.1 Public Homo sapiens 6 CLPSL2 24 110 108 CCDS HistoryNCBI Gene:389383Re-query CCDS DB by CCDS ID:69095.1Re-query CCDS DB by GeneID:389383See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360454.6 ENSP00000353639.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360454.6Link to Ensembl Protein Viewer:ENSP00000353639.2Re-query CCDS DB by Nucleotide ID:ENST00000360454Re-query CCDS DB by Protein ID:ENSP00000353639
Original member Current member NCBI NM_001286550.2 NP_001273479.1 Accepted alive Link to Nucleotide Sequence:NM_001286550.2Link to Protein Sequence:NP_001273479.1Re-query CCDS DB by Nucleotide ID:NM_001286550Re-query CCDS DB by Protein ID:NP_001273479Link to BLAST:NP_001273479.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273479.1 153 Q6UWE3-2 153 100% 0 0

Chromosomal Locations for CCDS 69095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 35776619 35776702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35777459 35777581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35777851 35777929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35779355 35779530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGGCCGCAGCCCTGGCGCTCGTGGCGGGGGTCCTGTCGGGGGCGGTGCTGCCCCTCTGGAGCGCGCTTC
CGCAATATAAAAAGAAAATCACAGACAGGTGCTTCCACCACTCTGAGTGCTACAGTGGCTGCTGCCTCAT
GGACTTGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGAATAACCATGATCTGCTTGCCCCAGTGG
TTGGAACTCTTCAAGGGCAGGGATCGCATCATATTCATCTATGAAGCACCTACCCCCAGCTTAGTATCTG
CACATAACCAAGGGAGCTACCAACATCATCTGCCCTTGCCGGATGGGCTTGACGTGCATATCCAAGGACT
TGATGTGTTCCCGCCGGTGCCATATGATTTAGAGGAAGATGCAGGCTGGTCACTGCTCCCTTGGGGCCAT
AGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGA

Translation (153 aa):
MAAALALVAGVLSGAVLPLWSALPQYKKKITDRCFHHSECYSGCCLMDLDSGGAFCAPRARITMICLPQW
LELFKGRDRIIFIYEAPTPSLVSAHNQGSYQHHLPLPDGLDVHIQGLDVFPPVPYDLEEDAGWSLLPWGH
RPWLPPTCSKSSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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