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Report for CCDS69093.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69093.1 Public Homo sapiens 6 ARMC12 24 110 108 CCDS HistoryNCBI Gene:221481Re-query CCDS DB by CCDS ID:69093.1Re-query CCDS DB by GeneID:221481See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69093.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373866.4 ENSP00000362973.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373866.4Link to Ensembl Protein Viewer:ENSP00000362973.3Re-query CCDS DB by Nucleotide ID:ENST00000373866Re-query CCDS DB by Protein ID:ENSP00000362973
Original member Current member NCBI NM_001286574.2 NP_001273503.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286574.2Link to Protein Sequence:NP_001273503.1Re-query CCDS DB by Nucleotide ID:NM_001286574Re-query CCDS DB by Protein ID:NP_001273503Link to BLAST:NP_001273503.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273503.1 340 Q5T9G4-1 340 100% 0 0

Chromosomal Locations for CCDS 69093.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 35737109 35737271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35738027 35738172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35738384 35738518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35747261 35747434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35747576 35747647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35748538 35748870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1023 nt):
ATGGGCAAGAGCATCCCCCAATACCTGGGGCAACTGGACATCCGCAAAAGCGTAGTCAGCCTGGCCACAG
GCGCCGGGGCGATCTACCTGCTCTACAAGGCCATCAAGGCTGGCATAAAATGCAAACCACCCCTCTGTAG
CAACTCACCCATCTGCATCGCCCGCCTGGCAGTCGAGCGAGAGCGGCACGGGCGGGACTCAGGTGAGCTC
CGGAGGCTCCTCAACTCTTTGGAGTGCAAACAGGATGAGTATGCCAAGAGCATGATCCTGCACAGTATCA
CTCGCTGTGTGTACTTGCTGGAGGCTGAGGCCTCTGCTTGTACTACGGATGACATCGTGTTGCTGGGCTA
CATGCTGGATGACAAGGACAACAGTGTCAAAACCCAAGCTCTGAATACACTTAAAGCTTTCTCTGGCATC
AGAAAATTCAGGCTCAAAATCCAGGAACACTCCATCAAAGTACTCGAACTGATCTCCACCATCTGGGACA
CGGAACTGCACATTGCGGGCCTCAGACTCCTCAACAACCTTCCACTGCCCGACTATGTGCATCCACAGCT
GCGACGGGTGATGCCTGCCTTGATGGAGATCCTGCAGTCAGACTACATCCTGGCACAGGTGCAAGCCGTA
CGACTGCTGAGCTACCTGGCACAGAAGAATGACCTTCTCTATGACATTCTCAACTGCCAGGTTCACTCCA
ACTTCCTAAACCTGTTCCAGCCCACACAGTCAGGGAGTCTCCTGTATGAGGTACTGGTGTTTGCTGAGCG
GCTGAGTGAGGGCCGGAACGCACCCCACTACCACGTGGTGAAATGGCATTACAACGAACAGTCCCTGCAT
GAATCCCTCTTTGGGGAAGAGTCCCGACTGGCAGACCGACTACTTGCCCTGGTCATCCACCCTGAGGAAG
ATGTTCAGATCCAGGCCTGCAAGGTCATTGTCAGCCTGCAGTATCCCCAGGACTTGAGAGCCCGGCCCTC
CTCCTGCCAGCCCAGTCGTTCCTACTTTAAAAACACGGAATAA

Translation (340 aa):
MGKSIPQYLGQLDIRKSVVSLATGAGAIYLLYKAIKAGIKCKPPLCSNSPICIARLAVERERHGRDSGEL
RRLLNSLECKQDEYAKSMILHSITRCVYLLEAEASACTTDDIVLLGYMLDDKDNSVKTQALNTLKAFSGI
RKFRLKIQEHSIKVLELISTIWDTELHIAGLRLLNNLPLPDYVHPQLRRVMPALMEILQSDYILAQVQAV
RLLSYLAQKNDLLYDILNCQVHSNFLNLFQPTQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLH
ESLFGEESRLADRLLALVIHPEEDVQIQACKVIVSLQYPQDLRARPSSCQPSRSYFKNTE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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