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Report for CCDS6906.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6906.2 Public Homo sapiens 9 DYNC2I2 24 110 108 CCDS HistoryNCBI Gene:89891Re-query CCDS DB by CCDS ID:6906.2Re-query CCDS DB by GeneID:89891See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6906.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372715.7 ENSP00000361800.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372715.7Link to Ensembl Protein Viewer:ENSP00000361800.2Re-query CCDS DB by Nucleotide ID:ENST00000372715Re-query CCDS DB by Protein ID:ENSP00000361800
Original member Current member NCBI NM_052844.4 NP_443076.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052844.4Link to Protein Sequence:NP_443076.2Re-query CCDS DB by Nucleotide ID:NM_052844Re-query CCDS DB by Protein ID:NP_443076Link to BLAST:NP_443076.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443076.2 536 Q96EX3 536 100% 0 0

Chromosomal Locations for CCDS 6906.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128633744 128633982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128634226 128634383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128634689 128634921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128635092 128635259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128635658 128635767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128636281 128636438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128636918 128637027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128640691 128640939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128656541 128656726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGGCAACCCGCGCGCAGCCGGGGCCACTCAGCCAGGCGGGAAGCGCTGGTGTTGCGGCGCTGGCGACAG
TCGGGGTTGCGAGCGGCCCGGGGCCGGGGCGGCCAGGGCCGCTGCAGGACGAGACCCTGGGTGTGGCGTC
CGTGCCCTCGCAGTGGAGGGCCGTCCAGGGCATCCGCTGGGAGACGAAAAGTTGCCAGACGGCCAGCATT
GCCACTGCCAGTGCATCCGCCCAGGCCAGGAATCATGTGGACGCCCAGGTGCAGACGGAGGCCCCCGTGC
CTGTCAGCGTGCAGCCCCCGTCCCAGTATGACATACCCAGGCTCGCAGCCTTTCTTCGGAGAGTGGAGGC
CATGGTCATCCGAGAGCTGAACAAGAATTGGCAGAGCCACGCGTTTGATGGCTTCGAGGTGAACTGGACC
GAGCAGCAGCAGATGGTGTCTTGTCTGTATACCCTGGGCTACCCGCCAGCCCAAGCGCAGGGTCTGCATG
TGACCAGCATCTCCTGGAACTCCACTGGCTCTGTGGTGGCCTGTGCCTACGGCCGGCTGGACCATGGGGA
CTGGAGCACGCTTAAGTCCTTCGTGTGTGCCTGGAACCTGGACCGGCGAGACCTGCGTCCCCAGCAGCCG
TCGGCCGTGGTGGAGGTCCCCAGCGCTGTCCTGTGTCTGGCCTTCCACCCCACGCAGCCCTCCCACGTCG
CAGGAGGGCTGTACAGTGGTGAGGTGTTGGTGTGGGACCTGAGCCGTCTTGAGGACCCGCTGCTGTGGCG
CACAGGCCTGACGGATGACACCCACACAGACCCTGTGTCCCAGGTGGTGTGGCTGCCCGAGCCTGGGCAC
AGCCACCGCTTCCAGGTGCTGAGTGTGGCCACCGACGGGAAGGTGCTACTCTGGCAGGGCATCGGGGTAG
GCCAGCTGCAGCTCACAGAGGGCTTCGCCCTGGTCATGCAGCAGCTGCCACGGAGCACCAAGCTCAAGAA
GCATCCCCGCGGGGAGACCGAGGTGGGCGCCACGGCAGTGGCCTTCTCCAGCTTTGACCCTAGGCTGTTC
ATTCTGGGCACGGAAGGCGGCTTCCCGCTCAAGTGTTCCCTGGCAGCTGGAGAGGCAGCCCTCACGCGGA
TGCCCAGCTCCGTGCCCCTGCGGGCCCCAGCACAGTTTACCTTCTCCCCCCACGGCGGTCCCATCTACTC
TGTGAGCTGTTCCCCCTTCCACAGGAATCTCTTCCTGAGCGCTGGGACTGACGGGCATGTCCACCTGTAC
TCCATGCTGCAGGCCCCTCCCTTGACTTCGCTGCAGCTCTCCCTCAAGTATCTGTTTGCTGTGCGCTGGT
CCCCAGTGCGGCCCTTGGTTTTTGCAGCTGCCTCTGGGAAAGGTGACGTGCAGCTGTTTGATCTCCAGAA
AAGCTCCCAGAAACCCACAGTTTTGATCAAGCAAACCCAGGATGAAAGCCCTGTCTACTGTCTGGAGTTC
AACAGCCAGCAGACTCAGCTCTTGGCTGCGGGCGATGCCCAGGGCACAGTGAAGGTGTGGCAGCTGAGCA
CAGAGTTCACGGAACAAGGGCCCCGGGAAGCTGAGGACCTGGACTGCCTGGCAGCAGAGGTGGCGGCCTG
A

Translation (536 aa):
MATRAQPGPLSQAGSAGVAALATVGVASGPGPGRPGPLQDETLGVASVPSQWRAVQGIRWETKSCQTASI
ATASASAQARNHVDAQVQTEAPVPVSVQPPSQYDIPRLAAFLRRVEAMVIRELNKNWQSHAFDGFEVNWT
EQQQMVSCLYTLGYPPAQAQGLHVTSISWNSTGSVVACAYGRLDHGDWSTLKSFVCAWNLDRRDLRPQQP
SAVVEVPSAVLCLAFHPTQPSHVAGGLYSGEVLVWDLSRLEDPLLWRTGLTDDTHTDPVSQVVWLPEPGH
SHRFQVLSVATDGKVLLWQGIGVGQLQLTEGFALVMQQLPRSTKLKKHPRGETEVGATAVAFSSFDPRLF
ILGTEGGFPLKCSLAAGEAALTRMPSSVPLRAPAQFTFSPHGGPIYSVSCSPFHRNLFLSAGTDGHVHLY
SMLQAPPLTSLQLSLKYLFAVRWSPVRPLVFAAASGKGDVQLFDLQKSSQKPTVLIKQTQDESPVYCLEF
NSQQTQLLAAGDAQGTVKVWQLSTEFTEQGPREAEDLDCLAAEVAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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