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Report for CCDS68391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
68391.1 Public Homo sapiens 3 MYRIP 24 110 108 CCDS HistoryNCBI Gene:25924Re-query CCDS DB by CCDS ID:68391.1Re-query CCDS DB by GeneID:25924See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 68391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396217.7 ENSP00000379519.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396217.7Link to Ensembl Protein Viewer:ENSP00000379519.3Re-query CCDS DB by Nucleotide ID:ENST00000396217Re-query CCDS DB by Protein ID:ENSP00000379519
Original member Current member NCBI NM_001284425.2 NP_001271354.1 Accepted alive Link to Nucleotide Sequence:NM_001284425.2Link to Protein Sequence:NP_001271354.1Re-query CCDS DB by Nucleotide ID:NM_001284425Re-query CCDS DB by Protein ID:NP_001271354Link to BLAST:NP_001271354.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271354.1 770 Q8NFW9-6 770 100% 0 0

Chromosomal Locations for CCDS 68391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 40044070 40044271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40162730 40162810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40166846 40166943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40167159 40167239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40169950 40170093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40182220 40182373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40189826 40190463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40209854 40210093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40233859 40234053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40244446 40244607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40250222 40250326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40250439 40250499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40251881 40251999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40258134 40258166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2313 nt):
ATGAGGAAGGCAGCAAGTGCAGCATCCTCTCGAAGCACCAGCAGTTTGTGGAGCACTGCTGCATGCGCTG
CTGCTCGCCCTTCACCTTCCTCGTCAACACCAAGCGCCAGTGTGGAGATTGCAAATTCAATGTCTGCAAG
AGCTGCTGCTCCTACCAGAAGCACGAAAAGGCCTGGGTCTGCTGCGTCTGCCAGCAAGCGAGGAGGAAGC
CTTTTTGAGTCAAACCTGGAGAATGAAGGAAGCATTTCTGGCAGTGATTCAACATTTTATAGGCAGTCAG
AAGGACATAGTGTGATGGACACCTTGGCTGTGGCCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAAT
TTCCAAAGCAGAGGCATATGGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACCACAAG
GAGGAGCTAACTGAGGAACTGGCCACGACAATCCTGCAGAAGATTATACGAAAACAGAAGAGCAAAAGTG
AGCAGCAAGTGGAAGAAGAGCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATGAGGG
GACCTCAGCATCCCCTGGAGGCTACCGTGCTCCCGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAATC
ACTGGAGAAGAAGCCCTGAAGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAAC
ACCCGAGAGCAGAGTCTGCTCTGCCCAGCTGGAAGAGTGTGGACAGGCTGGATGAAACAAACCTGGCCCC
AGTTTTGCAGAGCCCCGACGGGAACTGGGTGGCCCTGAAGGATGGCGCTCCACCCCCCACCCGACTACTG
GCCAAACCTAAGAGCGGGACGTTTCAGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAGA
TGGGCTCCGATAGCGAGGAAGACTTTGACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTCCCGGGC
CCTGCCCAGGAACCCCCAGCCTCAGCCCACACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCCTCC
CCATCCTCTGCACTCTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGGAGACCTCCTCCGCAGGCTCTT
CCCGAGAAGTTGGGCACCAGGCCAGACTGTCCTGGTTGCAGAGGAAGGCCCCCAGGAACCCTGCAGCTGA
GAAGATGCGCTTGCATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGAGACCTCGGAC
AGCAGCGAGCCGGAGGAGGCCCCCCACACCACAGACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGG
GCTCAGAAGAGCCAAGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGT
GTCGGATGATTTATCAGAGACAGACATCAGCAATGAGGCTCGGGATCCCCAGACTCTCACAGACACCACA
GAGGAGAAACGGAGAAACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAAAGGAGACTTCTTCAGGGG
AGGATCAGGAGTCTGAGCCCAAGACAGAATCTGAGAACCAGAAGGAAAGTCTGTCCTCTGAAGACAACAG
CCAGAGTGTCCAGGAAGAGCTGAAGAAGAAGTTTTCTGCTGTTTCTCTCTGCAACATCTCCACAGAAGTC
CTGAAAGTCATCAATGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCC
CTCCTGACAGACAGAAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTC
CCTGGAAGAAAATGTATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAA
GATGCCGCCCGCTGCATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCA
CGGCTGCAGCCCAAGTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGAC
CATTGCAGGATTAAACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGATCAGAAGCAAAGGACCCAG
GTACAAACCATAGATACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAAAAAA
TTGAGACATCTTCAGTGACTACCATTAAAACATTTAACCACAACTTCATTCTCCAAGGCTCCTCAACAAA
CAGGACTAAGGAAAGGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTGTGATGTAC
TGA

Translation (770 aa):
MRKAASAASSRSTSSLWSTAACAAARPSPSSSTPSASVEIANSMSARAAAPTRSTKRPGSAASASKRGGS
LFESNLENEGSISGSDSTFYRQSEGHSVMDTLAVALRVAEEAIEEAISKAEAYGDSLDKQNEASYLRDHK
EELTEELATTILQKIIRKQKSKSEQQVEEEPGWPHPQSCSTKVADEGTSASPGGYRAPAALWRSQSAFSI
TGEEALKTPPVEAPSRQPRDQGQHPRAESALPSWKSVDRLDETNLAPVLQSPDGNWVALKDGAPPPTRLL
AKPKSGTFQALEVASSVASAYDEMGSDSEEDFDWSEALSKLCPRSRALPRNPQPQPTQAQSSDQGPIAAS
PSSALSPNPEAMCSDSETSSAGSSREVGHQARLSWLQRKAPRNPAAEKMRLHGELDVNFNPQLASRETSD
SSEPEEAPHTTDRRARRWRRARLGSEEPSKEPSSPSAQLRDLDTHQVSDDLSETDISNEARDPQTLTDTT
EEKRRNRLYELAMKMSEKETSSGEDQESEPKTESENQKESLSSEDNSQSVQEELKKKFSAVSLCNISTEV
LKVINATEELIAGSTGPWESPQVPPDRQKGMFPRGTDQVRLDEQLTSLEENVYLAAGTVYGLETQLTELE
DAARCIHSGTDETHLADLEDQVATAAAQVHHAELQISDIESRISALTIAGLNIAPCVRFTRRRDQKQRTQ
VQTIDTSRQQRRKLPAPPVKAEKIETSSVTTIKTFNHNFILQGSSTNRTKERKGTTKDLMEPALESAVMY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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