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Report for CCDS6822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6822.1 Public Homo sapiens 9 BRINP1 24 110 108 CCDS HistoryNCBI Gene:1620Re-query CCDS DB by CCDS ID:6822.1Re-query CCDS DB by GeneID:1620See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6822.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265922.8 ENSP00000265922.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265922.8Link to Ensembl Protein Viewer:ENSP00000265922.2Re-query CCDS DB by Nucleotide ID:ENST00000265922Re-query CCDS DB by Protein ID:ENSP00000265922
Original member Current member NCBI NM_014618.3 NP_055433.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014618.3Link to Protein Sequence:NP_055433.2Re-query CCDS DB by Nucleotide ID:NM_014618Re-query CCDS DB by Protein ID:NP_055433Link to BLAST:NP_055433.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055433.2 761 O60477-1 761 100% 0 0

Chromosomal Locations for CCDS 6822.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 119167084 119168224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119208719 119208941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119213919 119214155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119238655 119238760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119242047 119242216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119248960 119249150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119313138 119313355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2286 nt):
ATGAACTGGAGGTTTGTTGAGCTCCTCTACTTCCTGTTTATATGGGGCCGTATCTCAGTGCAGCCCTCCC
ACCAGGAACCAGCTGGGACAGACCAACATGTCTCCAAGGAATTTGATTGGCTCATTTCAGACAGGGGGCC
TTTCCACCACTCCAGGAGCTACCTATCCTTTGTGGAAAGACACCGTCAAGGATTTACAACCAGATATAAA
ATATACAGGGAGTTTGCCCGTTGGAAGGTGAGGAACACAGCCATCGAGAGGAGAGATCTGGTCCGCCATC
CAGTGCCCCTCATGCCGGAGTTTCAAAGGAGCATCCGCCTGCTTGGCAGGAGACCTACCACTCAGCAGTT
CATCGATACCATCATCAAAAAGTACGGCACCCACCTGCTCATCTCAGCCACATTGGGAGGGGAGGAGGCT
TTGACCATGTATATGGACAAAAGTCGCCTCGACAGGAAGTCAGGGAATGCCACTCAAAGTGTTGAAGCTC
TGCACCAGCTCGCATCATCCTACTTTGTTGACCGTGATGGTACCATGAGGAGGCTTCATGAGATCCAGAT
ATCAACTGGAGCAATCAAGGTCACAGAGACACGCACTGGGCCTCTGGGCTGTAACAGCTATGACAATCTG
GACTCTGTGAGTTCCGTCCTTCTGCAAAGCACGGAGAGCAAACTGCACCTTCAAGGTCTTCAGATAATCT
TTCCTCAGTATCTGCAAGAGAAGTTTGTCCAGTCGGCCTTGAGCTATATCATGTGCAATGGGGAGGGGGA
GTACCTGTGCCAGAACAGCCAGTGTCGCTGCCAATGTGCCGAGGAGTTTCCGCAGTGCAACTGCCCCATC
ACGGACATCCAGATCATGGAGTACACGCTGGCCAACATGGCCAAGTCTTGGGCCGAAGCTTATAAGGACC
TGGAGAATTCAGATGAGTTTAAATCATTTATGAAGCGCCTCCCCAGCAACCACTTCCTGACCATCGGAAG
CATCCATCAGCACTGGGGCAATGACTGGGACCTGCAGAACCGCTACAAGCTCCTGCAGAGTGCCACGGAG
GCACAGAGACAAAAGATCCAACGCACTGCCCGCAAGCTTTTCGGCCTCAGTGTACGCTGTCGCCACAATC
CCAACCACCAGCTGCCTAGAGAGAGGACAATTCAGCAGTGGCTTGCAAGGGTCCAGTCACTCCTCTACTG
TAATGAGAATGGGTTTTGGGGAACCTTCCTGGAGAGCCAGCGGAGCTGCGTGTGCCACGGCAGCACCACG
CTGTGCCAGCGCCCCATCCCCTGCGTGATAGGCGGGAACAACAGCTGCGCCATGTGCAGCCTGGCCAACA
TCTCCCTCTGCGGCTCCTGCAACAAGGGCTACAAGCTGTATCGAGGCCGCTGTGAACCACAGAACGTGGA
CTCGGAGCGGAGCGAGCAGTTCATCAGCTTTGAGACTGACCTGGACTTCCAGGACCTGGAGCTGAAGTAC
CTGCTGCAGAAGATGGACTCACGCCTCTACGTCCACACCACCTTCATCAGCAACGAGATCCGCCTCGACA
CCTTCTTTGACCCTCGGTGGCGCAAGCGCATGTCCCTCACTCTCAAGAGCAACAAGAACCGCATGGACTT
CATCCACATGGTGATCGGCATGTCCATGCGCATCTGCCAGATGCGCAACAGCAGCCTGGACCCCATGTTC
TTTGTCTATGTCAACCCCTTTAGCGGGAGCCATTCGGAGGGCTGGAACATGCCCTTCGGGGAATTTGGCT
ACCCACGCTGGGAGAAGATCCGTCTCCAAAACAGCCAGTGCTACAACTGGACTCTTTTGCTGGGCAATCG
GTGGAAAACATTTTTCGAGACGGTCCACATCTACCTACGTAGTCGGACTCGGCTACCTACCCTACTGCGA
AATGAGACTGGCCAGGGCCCCGTGGACCTGTCGGATCCCTCCAAGAGGCAGTTCTACATCAAGATCTCAG
ACGTGCAGGTGTTTGGGTATAGCCTGAGGTTCAACGCCGACCTCCTGCGCAGTGCAGTGCAGCAGGTCAA
CCAGTCCTACACACAGGGCGGCCAGTTCTATTCCTCTTCGTCAGTGATGCTCCTCTTGTTGGATATTCGG
GACCGAATTAATCGCCTGGCCCCTCCTGTGGCCCCGGGGAAACCCCAGCTGGACTTGTTCTCCTGTATGC
TGAAACACCGCCTGAAACTGACCAACAGCGAGATCATCAGGGTGAACCACGCCTTGGACCTGTACAACAC
GGAGATCCTCAAACAGTCGGACCAGATGACAGCCAAACTCTGCTAA

Translation (761 aa):
MNWRFVELLYFLFIWGRISVQPSHQEPAGTDQHVSKEFDWLISDRGPFHHSRSYLSFVERHRQGFTTRYK
IYREFARWKVRNTAIERRDLVRHPVPLMPEFQRSIRLLGRRPTTQQFIDTIIKKYGTHLLISATLGGEEA
LTMYMDKSRLDRKSGNATQSVEALHQLASSYFVDRDGTMRRLHEIQISTGAIKVTETRTGPLGCNSYDNL
DSVSSVLLQSTESKLHLQGLQIIFPQYLQEKFVQSALSYIMCNGEGEYLCQNSQCRCQCAEEFPQCNCPI
TDIQIMEYTLANMAKSWAEAYKDLENSDEFKSFMKRLPSNHFLTIGSIHQHWGNDWDLQNRYKLLQSATE
AQRQKIQRTARKLFGLSVRCRHNPNHQLPRERTIQQWLARVQSLLYCNENGFWGTFLESQRSCVCHGSTT
LCQRPIPCVIGGNNSCAMCSLANISLCGSCNKGYKLYRGRCEPQNVDSERSEQFISFETDLDFQDLELKY
LLQKMDSRLYVHTTFISNEIRLDTFFDPRWRKRMSLTLKSNKNRMDFIHMVIGMSMRICQMRNSSLDPMF
FVYVNPFSGSHSEGWNMPFGEFGYPRWEKIRLQNSQCYNWTLLLGNRWKTFFETVHIYLRSRTRLPTLLR
NETGQGPVDLSDPSKRQFYIKISDVQVFGYSLRFNADLLRSAVQQVNQSYTQGGQFYSSSSVMLLLLDIR
DRINRLAPPVAPGKPQLDLFSCMLKHRLKLTNSEIIRVNHALDLYNTEILKQSDQMTAKLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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