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Report for CCDS6706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6706.1 Public Homo sapiens 9 FAM120A 24 110 108 CCDS HistoryNCBI Gene:23196Re-query CCDS DB by CCDS ID:6706.1Re-query CCDS DB by GeneID:23196See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6706.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000277165.11 ENSP00000277165.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000277165.11Link to Ensembl Protein Viewer:ENSP00000277165.5Re-query CCDS DB by Nucleotide ID:ENST00000277165Re-query CCDS DB by Protein ID:ENSP00000277165
Original member Current member NCBI NM_014612.5 NP_055427.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014612.5Link to Protein Sequence:NP_055427.2Re-query CCDS DB by Nucleotide ID:NM_014612Re-query CCDS DB by Protein ID:NP_055427Link to BLAST:NP_055427.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055427.2 1118 Q9NZB2-1 1118 100% 0 0

Chromosomal Locations for CCDS 6706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 93451916 93452389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93471141 93471387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93476256 93476338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93497471 93497599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93498790 93498886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93515667 93515767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93515983 93516269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93527155 93527242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93529353 93529580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93532155 93532329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93543222 93543471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93550577 93550691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93556382 93556591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93557827 93558010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93558581 93558718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93561109 93561250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93562208 93562304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 93564229 93564540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3357 nt):
ATGGGCGTGCAGGGCTTCCAGGACTACATCGAGAAGCACTGCCCGAGCGCCGTGGTGCCGGTGGAGCTGC
AGAAGCTGGCCCGGGGCAGCCTGGTGGGCGGCGGGCGGCAGCGGCCCCCGCAGACCCCGCTGCGCCTGCT
GGTGGACGCCGACAACTGCCTGCACCGCCTCTACGGCGGCTTCTACACCGACTGGGTCAGCGGCGGCCAG
TGGAACCACATGCTTGGCTACCTGGCGGCGCTGGCCAAGGCCTGCTTCGGCGGCAACATCGAGCTCTTCG
TCTTCTTCAACGGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCA
GACGGCACAGCAGATCGTCAGCCATGTCCAGAACAAGGGCACCCCGCCGCCAAAGGTCTGGTTCCTGCCG
CCCGTCTGCATGGCCCACTGCATCCGCCTGGCGCTCATCCGCTTCCACGTCAAGGTTGCACAGAGCATTG
AGGATCACCATCAGGAAGTGATTGGTTTCTGCAGAGAGAATGGTTTCCATGGCTTGGTTGCGTATGACTC
TGATTATGCACTGTGCAACATCCCCTACTATTTCAGTGCCCATGCCCTAAAACTGAGCCGGAACGGGAAA
AGTCTCACCACAAGCCAATATCTGATGCATGAAGTTGCCAAGCAACTGGACCTGAATCCAAATCGTTTTC
CTATTTTTGCTGCTCTCTTAGGAAATCACATTCTGCCTGATGAAGATCTGGCTTCCTTTCACTGGAGTTT
ACTTGGTCCAGAACATCCACTAGCCTCACTAAAGGTCCGGGCCCACCAGCTGGTCTTGCCACCTTGCGAC
GTAGTGATCAAAGCCGTTGCTGACTATGTACGCAACATTCAGGACACCTCTGACTTGGATGCCATAGCTA
AAGATGTTTTCCAGCATTCACAGTCTAGAACAGATGACAAAGTTATTCGATTTAAGAGAGCAATTGGATA
TTATTCAGCGACTAGTAAGCCTATGTCATTTCATCCACCACATTACTTAGCAGCCAGACCCGGTCCGTTT
GGAATGCCTGGGATGGTGCCGCCGCATGTTCCTCCTCAGATGCTCAACATTCCGCAGACCTCTCTGCAAG
CAAAGCCCGTGGCCCCACAGGTGCCCAGCCCAGGGGGCGCCCCGGGCCAGGGTCCATACCCGTACAGCCT
CTCTGAGCCAGCACCTCTCACTTTGGACACGAGCGGGAAGAATCTGACGGAGCAGAACAGCTACAGCAAC
ATTCCTCACGAAGGGAAGCACACGCCGCTGTATGAGCGGTCCTCGCCCATCAACCCGGCCCAGAGCGGCA
GCCCCAACCACGTGGATTCCGCCTACTTCCCTGGCTCTTCTACATCGTCATCTTCCGACAACGACGAGGG
CAGCGGAGGGGCGACAAACCATATCAGCGGGAACAAGATTGGCTGGGAGAAGACGGGAAGCCACTCAGAG
CCTCAGGCACGAGGAGACCCAGGAGACCAAACAAAGGCAGAAGGCTCGTCCACTGCCTCTTCAGGAAGCC
AACTAGCCGAAGGCAAGGGAAGCCAGATGGGCACTGTCCAGCCAATCCCGTGCCTCCTGTCGATGCCCAC
CAGGAACCACATGGACATCACCACACCTCCCCTGCCCCCCGTCGCACCTGAGGTGCTGAGAGTGGCCGAG
CACAGGCACAAGAAGGGGCTGATGTACCCCTACATCTTCCATGTCCTGACGAAGGGTGAAATCAAAATTG
CTGTTTCTATTGAAGATGAAGCCAACAAGGACCTGCCTCCGGCCGCTCTGCTCTATAGGCCAGTTCGTCA
GTATGTTTACGGAGTCCTGTTTAGTTTGGCAGAAAGCAGAAAGAAAACTGAGAGACTTGCTTTTAGAAAG
AACAGACTTCCACCAGAATTTTCACCAGTGATCATTAAAGAATGGGCAGCTTACAAAGGAAAGTCTCCTC
AAACCCCGGAACTGGTTGAAGCTCTTGCCTTCAGGGAGTGGACCTGCCCCAACCTGAAGAGGCTGTGGTT
GGGTAAGGCGGTAGAGGACAAGAACCGCAGGATGAGGGCCTTCCTGGCCTGCATGAGGTCGGACACCCCA
GCCATGCTCAACCCTGCCAACGTGCCCACTCACCTCATGGTGCTCTGCTGCGTCTTACGGTACATGGTGC
AGTGGCCGGGAGCACGCATCCTTCGGCGTCAGGAGCTAGATGCCTTCCTGGCTCAGGCGCTGTCCCCCAA
ACTCTACGAGCCTGATCAGCTCCAGGAGCTCAAGATTGAGAACCTAGATCCCCGAGGAATTCAGCTATCA
GCTCTCTTCATGAGTGGAGTAGACATGGCCTTGTTTGCAAATGATGCATGCGGACAGCCAATCCCCTGGG
AACACTGTTGTCCTTGGATGTATTTTGATGGGAAGCTCTTCCAATCCAAACTCCTCAAAGCCAGCCGGGA
AAAGACCCCACTCATTGACCTCTGTGATGGTCAGGCTGATCAGGCTGCCAAGGTAGAGAAGATGCGCCAG
AGCGTCCTCGAGGGGCTCAGCTTCTCCAGGCAGAGCCACACGCTCCCTTTCCCGCCGCCACCTGCCCTGC
CCTTCTACCCTGCCTCTGCGTACCCCCGGCACTTTGGGCCTGTCCCACCCTCTCAGGGCAGGGGCAGAGG
CTTTGCAGGCGTCTGTGGCTTTGGAGGCCCCTATGGGGAAACGGTAGCAACAGGCCCTTACCGTGCCTTC
CGTGTGGCGGCAGCATCGGGACACTGCGGAGCCTTCTCAGGCAGTGACAGCAGCAGGACTAGCAAGTCCC
AGGGCGGAGTCCAACCTATACCTTCTCAGGGAGGCAAACTAGAAATAGCTGGCACTGTGGTTGGCCATTG
GGCTGGGAGCAGGCGGGGCCGTGGGGGCCGGGGGCCTTTCCCCCTGCAGGTGGTTTCTGTCGGAGGACCA
GCTAGAGGGCGTCCAAGAGGAGTTATTTCCACCCCAGTGATTAGAACATTTGGAAGAGGTGGAAGGTACT
ATGGCAGAGGTTACAAAAACCAGGCAGCAATTCAGGGCAGACCTCCTTATGCTGCTTCAGCAGAAGAAGT
GGCCAAAGAACTTAAGTCAAAATCTGGGGAATCGAAGTCCTCTGCTATGTCTTCAGACGGGTCCCTGGCT
GAAAACGGAGTGATGGCCGAGGAGAAGCCGGCTCCCCAGATGAACGGGAGCACGGGTGACGCCAGGGCCC
CCAGCCACTCTGAAAGTGCCTTGAATAATGACTCTAAAACGTGCAATACAAATCCTCATTTAAATGCACT
AAGTACAGACAGCGCTTGCCGCAGAGAAGCTGCTCTGGAGGCAGCTGTCTTAAATAAAGAAGAGTAA

Translation (1118 aa):
MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLVDADNCLHRLYGGFYTDWVSGGQ
WNHMLGYLAALAKACFGGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLP
PVCMAHCIRLALIRFHVKVAQSIEDHHQEVIGFCRENGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGK
SLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCD
VVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKPMSFHPPHYLAARPGPF
GMPGMVPPHVPPQMLNIPQTSLQAKPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSN
IPHEGKHTPLYERSSPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATNHISGNKIGWEKTGSHSE
PQARGDPGDQTKAEGSSTASSGSQLAEGKGSQMGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAE
HRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRK
NRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRRMRAFLACMRSDTP
AMLNPANVPTHLMVLCCVLRYMVQWPGARILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLS
ALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQSKLLKASREKTPLIDLCDGQADQAAKVEKMRQ
SVLEGLSFSRQSHTLPFPPPPALPFYPASAYPRHFGPVPPSQGRGRGFAGVCGFGGPYGETVATGPYRAF
RVAAASGHCGAFSGSDSSRTSKSQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGP
ARGRPRGVISTPVIRTFGRGGRYYGRGYKNQAAIQGRPPYAASAEEVAKELKSKSGESKSSAMSSDGSLA
ENGVMAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNTNPHLNALSTDSACRREAALEAAVLNKEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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