NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS66808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66808.1 Public Homo sapiens 15 CALML4 24 110 108 CCDS HistoryNCBI Gene:91860Re-query CCDS DB by CCDS ID:66808.1Re-query CCDS DB by GeneID:91860See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66808.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395463.3 ENSP00000435285.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395463.3Link to Ensembl Protein Viewer:ENSP00000435285.2Re-query CCDS DB by Nucleotide ID:ENST00000395463Re-query CCDS DB by Protein ID:ENSP00000435285
Original member Current member NCBI NM_001286694.1 NP_001273623.1 Accepted alive Link to Nucleotide Sequence:NM_001286694.1Link to Protein Sequence:NP_001273623.1Re-query CCDS DB by Nucleotide ID:NM_001286694Re-query CCDS DB by Protein ID:NP_001273623Link to BLAST:NP_001273623.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273623.1 120 Q96GE6-2 120 100% 0 0

Chromosomal Locations for CCDS 66808.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 68194015 68194112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68197440 68197628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68199541 68199616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (363 nt):
ATGGTGGCCATGAGGTGCCTGGGGGCCAGCCCGACGCCAGGGGAGGTGCAGCGGCACCTGCAGACCCACG
GGATAGACGGAAATGGAGAGCTGGATTTCTCCACTTTTCTGACCATTATGCACATGCAAATAAAACAAGA
AGACCCAAAGAAAGAAATTCTTCTAGCCATGTTGATGGTGGACAAGGAGAAGAAAGGTTACGTCATGGCG
TCCGACCTGCGGTCAAAACTCACGAGTCTGGGGGAGAAGCTCACCCACAAGGAAGTGGATGATCTCTTCA
GGGAAGCAGATATCGAACCCAATGGCAAAGTGAAGTATGATGAATTTATCCACAAGATCACCCTTCCTGG
ACGGGACTATTGA

Translation (120 aa):
MVAMRCLGASPTPGEVQRHLQTHGIDGNGELDFSTFLTIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMA
SDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYDEFIHKITLPGRDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH