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Report for CCDS6622.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6622.2 Public Homo sapiens 9 PGM5 24 110 108 CCDS HistoryNCBI Gene:5239Re-query CCDS DB by CCDS ID:6622.2Re-query CCDS DB by GeneID:5239See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6622.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396396.6 ENSP00000379678.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396396.6Link to Ensembl Protein Viewer:ENSP00000379678.1Re-query CCDS DB by Nucleotide ID:ENST00000396396Re-query CCDS DB by Protein ID:ENSP00000379678
Original member Current member NCBI NM_021965.4 NP_068800.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021965.4Link to Protein Sequence:NP_068800.2Re-query CCDS DB by Nucleotide ID:NM_021965Re-query CCDS DB by Protein ID:NP_068800Link to BLAST:NP_068800.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068800.2 567 Q15124-1 567 100% 0 0

Chromosomal Locations for CCDS 6622.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 68357128 68357388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68378199 68378361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68384398 68384544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68387463 68387588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68391534 68391724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68392319 68392473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68465093 68465208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68479418 68479553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68483865 68484048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68499227 68499361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 68529567 68529656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1704 nt):
ATGGAGGGGAGCCCCATCCCGGTGCTGACAGTGCCCACCGCGCCCTACGAGGACCAGCGGCCGGCCGGCG
GCGGGGGTCTGCGGCGACCCACCGGCCTCTTCGAGGGCCAGCGCAACTACCTGCCCAACTTTATCCAGAG
CGTGCTGTCGTCCATCGACCTGCGCGACCGTCAGGGCTGCACCATGGTGGTGGGCAGCGACGGCAGGTAC
TTTAGCAGGACGGCCATCGAGATCGTGGTGCAGATGGCCGCGGCCAACGGGATTGGACGACTGATTATTG
GACAGAATGGCATCTTGTCGACACCTGCGGTCTCCTGCATTATCAGGAAGATCAAGGCAGCTGGTGGAAT
CATTCTAACAGCCAGCCACTGCCCTGGAGGACCAGGGGGAGAGTTTGGAGTGAAGTTTAATGTTGCCAAT
GGAGGTCCTGCACCCGATGTTGTCTCAGACAAAATCTACCAAATCAGCAAAACGATTGAGGAATATGCTA
TATGTCCTGATCTCCGAATCGACCTATCTCGACTAGGAAGACAAGAATTTGACCTAGAAAACAAATTCAA
ACCATTCAGAGTGGAGATAGTGGACCCAGTGGATATCTATCTTAACCTCCTTCGGACCATCTTTGACTTT
CATGCCATCAAGGGTTTGCTGACTGGACCCAGCCAACTGAAGATTCGCATTGACGCAATGCACGGAGTTA
TGGGACCTTATGTGAGAAAAGTTCTGTGTGATGAGCTGGGGGCCCCAGCCAATTCTGCAATAAACTGTGT
TCCCCTGGAAGACTTTGGAGGGCAGCACCCTGACCCAAACCTGACATATGCAACGACTCTTCTGGAAGCA
ATGAAAGGAGGAGAATATGGATTTGGAGCTGCATTTGATGCTGATGGGGACCGTTATATGATCCTAGGCC
AAAATGGCTTCTTTGTGAGCCCTTCTGACTCCCTGGCCATCATTGCTGCCAACCTCTCTTGCATTCCATA
TTTCCGTCAGATGGGGGTCCGCGGGTTTGGGAGGAGTATGCCAACCAGCATGGCCCTGGACAGAGTGGCC
AAATCAATGAAGGTCCCTGTATATGAGACCCCAGCTGGATGGAGATTCTTCTCAAATCTGATGGACTCAG
GACGTTGCAATCTGTGTGGGGAAGAGAGCTTTGGCACTGGCTCTGACCACCTCCGAGAGAAGGATGGCCT
GTGGGCTGTCTTGGTCTGGCTCTCCATTATTGCTGCCCGGAAGCAGAGTGTGGAGGAAATTGTCCGAGAT
CACTGGGCCAAATTTGGCCGCCACTACTATTGCAGGTTTGACTATGAGGGGTTGGATCCCAAGACGACAT
ATTATATCATGAGGGACCTGGAGGCCCTGGTCACAGACAAATCCTTCATTGGCCAGCAGTTTGCTGTGGG
GAGCCATGTCTACAGCGTGGCGAAGACGGATAGTTTTGAATACGTGGACCCTGTGGATGGCACTGTGACC
AAGAAACAGGGCCTAAGGATCATTTTCTCGGATGCATCACGGCTCATCTTCCGGCTCAGTTCCTCCAGTG
GTGTGCGGGCCACCCTCAGACTGTACGCAGAGAGCTACGAGAGGGATCCCAGCGGCCATGACCAGGAGCC
ACAGGCAGTGCTGAGCCCTCTCATAGCCATCGCACTGAAAATATCCCAGATTCATGAGAGAACTGGCCGG
AGGGGACCCACTGTCATCACCTGA

Translation (567 aa):
MEGSPIPVLTVPTAPYEDQRPAGGGGLRRPTGLFEGQRNYLPNFIQSVLSSIDLRDRQGCTMVVGSDGRY
FSRTAIEIVVQMAAANGIGRLIIGQNGILSTPAVSCIIRKIKAAGGIILTASHCPGGPGGEFGVKFNVAN
GGPAPDVVSDKIYQISKTIEEYAICPDLRIDLSRLGRQEFDLENKFKPFRVEIVDPVDIYLNLLRTIFDF
HAIKGLLTGPSQLKIRIDAMHGVMGPYVRKVLCDELGAPANSAINCVPLEDFGGQHPDPNLTYATTLLEA
MKGGEYGFGAAFDADGDRYMILGQNGFFVSPSDSLAIIAANLSCIPYFRQMGVRGFGRSMPTSMALDRVA
KSMKVPVYETPAGWRFFSNLMDSGRCNLCGEESFGTGSDHLREKDGLWAVLVWLSIIAARKQSVEEIVRD
HWAKFGRHYYCRFDYEGLDPKTTYYIMRDLEALVTDKSFIGQQFAVGSHVYSVAKTDSFEYVDPVDGTVT
KKQGLRIIFSDASRLIFRLSSSSGVRATLRLYAESYERDPSGHDQEPQAVLSPLIAIALKISQIHERTGR
RGPTVIT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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