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Report for CCDS6589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6589.1 Public Homo sapiens 9 GBA2 24 110 108 CCDS HistoryNCBI Gene:57704Re-query CCDS DB by CCDS ID:6589.1Re-query CCDS DB by GeneID:57704See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6589.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378103.7 ENSP00000367343.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378103.7Link to Ensembl Protein Viewer:ENSP00000367343.3Re-query CCDS DB by Nucleotide ID:ENST00000378103Re-query CCDS DB by Protein ID:ENSP00000367343
Original member Current member NCBI NM_020944.3 NP_065995.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020944.3Link to Protein Sequence:NP_065995.1Re-query CCDS DB by Nucleotide ID:NM_020944Re-query CCDS DB by Protein ID:NP_065995Link to BLAST:NP_065995.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065995.1 927 Q9HCG7-1 927 100% 0 0

Chromosomal Locations for CCDS 6589.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 35737169 35737447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35737748 35737939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35738037 35738152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35738232 35738374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35738526 35738632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35738752 35738903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35739002 35739109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35739315 35739419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35739628 35739800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35739998 35740123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35740209 35740362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35740526 35740628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35740825 35741064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35741672 35741890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35744297 35744412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35744615 35744706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35748346 35748704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2784 nt):
ATGGGGACCCAGGATCCAGGGAACATGGGAACCGGCGTCCCAGCCTCGGAGCAGATAAGCTGTGCCAAAG
AGGATCCACAAGTTTATTGCCCTGAAGAGACTGGCGGCACCAAGGATGTGCAGGTTACAGACTGTAAGAG
TCCCGAAGACAGCCGACCCCCAAAAGAGACGGACTGCTGCAATCCGGAGGACTCTGGGCAGCTGATGGTT
TCCTATGAGGGTAAAGCTATGGGCTACCAGGTGCCTCCCTTTGGCTGGCGCATCTGTCTGGCTCATGAGT
TTACAGAGAAGAGGAAACCCTTTCAAGCTAACAACGTCTCCCTAAGCAACATGATAAAGCATATAGGCAT
GGGCTTGAGGTACCTGCAGTGGTGGTACCGGAAGACCCATGTGGAAAAGAAGACACCTTTCATCGACATG
ATCAATTCTGTACCCCTAAGACAGATTTATGGTTGTCCCTTGGGTGGCATCGGGGGAGGCACTATTACCC
GTGGCTGGAGAGGCCAGTTCTGTCGTTGGCAGCTTAACCCTGGAATGTATCAGCACCGGACAGTCATCGC
TGACCAATTCACAGTGTGCCTGCGTCGGGAAGGGCAGACTGTGTACCAGCAAGTCCTGTCCCTGGAGCGC
CCAAGTGTCCTCCGCAGCTGGAACTGGGGCCTGTGTGGGTACTTTGCTTTCTACCATGCCCTCTATCCCC
GAGCCTGGACTGTCTATCAGCTTCCTGGCCAGAATGTCACCCTCACCTGCCGTCAGATCACACCCATCTT
GCCCCATGACTACCAGGACAGCAGCCTGCCTGTAGGAGTCTTTGTGTGGGATGTGGAAAATGAAGGGGAC
GAAGCTCTAGATGTGTCCATCATGTTCTCCATGCGGAATGGACTGGGTGGTGGAGACGATGCCCCAGGGG
GTTTGTGGAATGAGCCCTTCTGTCTGGAGCGTAGCGGGGAAACTGTCCGGGGGCTGCTCCTGCATCATCC
AACCCTTCCAAACCCCTACACGATGGCTGTGGCTGCACGAGTCACGGCAGCTACCACGGTAACCCACATC
ACAGCCTTTGACCCTGACAGCACGGGGCAGCAGGTGTGGCAGGATCTACTTCAGGATGGACAGCTGGACT
CTCCCACTGGCCAAAGCACCCCTACGCAGAAAGGAGTAGGCATTGCTGGAGCTGTGTGTGTTTCCAGCAA
GTTGCGACCTCGAGGCCAGTGCCGCCTGGAGTTTTCACTGGCTTGGGACATGCCCAGGATCATGTTTGGA
GCTAAAGGCCAAGTCCACTACAGGCGGTATACAAGGTTCTTTGGCCAGGATGGAGATGCAGCACCTGCCC
TCAGCCACTATGCACTGTGCCGATACGCAGAGTGGGAAGAGAGGATCTCAGCTTGGCAGAGCCCGGTATT
GGATGACAGATCACTGCCTGCCTGGTACAAATCTGCGCTGTTCAATGAACTATACTTCCTGGCTGATGGA
GGCACAGTGTGGCTGGAAGTTCTTGAGGACTCCCTACCAGAGGAGCTGGGCAGAAACATGTGTCACCTCC
GCCCCACCCTACGGGACTACGGTCGATTTGGCTACCTTGAGGGCCAGGAGTACCGCATGTACAACACATA
TGATGTCCACTTTTATGCTTCCTTTGCCCTCATCATGCTCTGGCCCAAACTTGAGCTCAGCCTACAGTAT
GACATGGCTCTGGCCACTCTCAGGGAGGACCTGACACGGCGACGGTACCTGATGAGTGGGGTGATGGCAC
CTGTGAAAAGGAGGAACGTCATCCCCCATGATATTGGGGACCCAGATGATGAACCATGGCTCCGCGTCAA
TGCATATTTAATCCATGATACTGCTGATTGGAAGGACCTGAACCTGAAGTTTGTGCTGCAGGTTTATCGG
GACTATTACCTCACGGGTGATCAAAACTTCCTGAAGGACATGTGGCCTGTGTGTCTAGCTGTGATGGAAT
CTGAAATGAAGTTTGACAAGGACCATGATGGACTCATTGAAAATGGAGGCTATGCAGACCAGACCTATGA
TGGATGGGTGACCACAGGCCCCAGTGCTTACTGTGGAGGGCTGTGGCTGGCAGCTGTGGCTGTGATGGTC
CAGATGGCTGCTCTGTGTGGGGCACAGGACATCCAGGATAAGTTTTCTTCTATCCTCAGCCGGGGCCAAG
AAGCCTATGAGAGACTGCTGTGGAATGGCCGCTATTACAACTATGACAGCAGCTCTCGGCCTCAGTCTCG
TAGTGTTATGTCTGACCAGTGTGCTGGACAGTGGTTCCTGAAGGCCTGTGGCCTAGGAGAAGGAGACACT
GAGGTGTTTCCTACCCAACATGTGGTCCGTGCTCTCCAAACTATCTTTGAGCTGAACGTCCAGGCCTTTG
CAGGAGGGGCCATGGGGGCTGTGAATGGGATGCAGCCCCATGGTGTCCCTGATAAATCCAGTGTGCAGTC
TGATGAAGTCTGGGTGGGTGTGGTCTACGGGCTGGCAGCTACCATGATCCAAGAGGGCCTGACTTGGGAG
GGCTTCCAGACAGCTGAAGGCTGCTACCGTACCGTGTGGGAGCGCCTGGGTCTGGCCTTCCAGACCCCAG
AGGCATACTGCCAGCAGCGAGTGTTCCGCTCACTGGCCTACATGCGGCCACTGAGCATATGGGCCATGCA
GCTAGCCCTGCAACAGCAGCAGCACAAAAAGGCCTCCTGGCCAAAAGTCAAACAGGGCACAGGACTAAGG
ACAGGGCCTATGTTTGGACCAAAGGAAGCCATGGCAAACCTGAGCCCAGAGTGA

Translation (927 aa):
MGTQDPGNMGTGVPASEQISCAKEDPQVYCPEETGGTKDVQVTDCKSPEDSRPPKETDCCNPEDSGQLMV
SYEGKAMGYQVPPFGWRICLAHEFTEKRKPFQANNVSLSNMIKHIGMGLRYLQWWYRKTHVEKKTPFIDM
INSVPLRQIYGCPLGGIGGGTITRGWRGQFCRWQLNPGMYQHRTVIADQFTVCLRREGQTVYQQVLSLER
PSVLRSWNWGLCGYFAFYHALYPRAWTVYQLPGQNVTLTCRQITPILPHDYQDSSLPVGVFVWDVENEGD
EALDVSIMFSMRNGLGGGDDAPGGLWNEPFCLERSGETVRGLLLHHPTLPNPYTMAVAARVTAATTVTHI
TAFDPDSTGQQVWQDLLQDGQLDSPTGQSTPTQKGVGIAGAVCVSSKLRPRGQCRLEFSLAWDMPRIMFG
AKGQVHYRRYTRFFGQDGDAAPALSHYALCRYAEWEERISAWQSPVLDDRSLPAWYKSALFNELYFLADG
GTVWLEVLEDSLPEELGRNMCHLRPTLRDYGRFGYLEGQEYRMYNTYDVHFYASFALIMLWPKLELSLQY
DMALATLREDLTRRRYLMSGVMAPVKRRNVIPHDIGDPDDEPWLRVNAYLIHDTADWKDLNLKFVLQVYR
DYYLTGDQNFLKDMWPVCLAVMESEMKFDKDHDGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMV
QMAALCGAQDIQDKFSSILSRGQEAYERLLWNGRYYNYDSSSRPQSRSVMSDQCAGQWFLKACGLGEGDT
EVFPTQHVVRALQTIFELNVQAFAGGAMGAVNGMQPHGVPDKSSVQSDEVWVGVVYGLAATMIQEGLTWE
GFQTAEGCYRTVWERLGLAFQTPEAYCQQRVFRSLAYMRPLSIWAMQLALQQQQHKKASWPKVKQGTGLR
TGPMFGPKEAMANLSPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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