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Report for CCDS65183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65183.1 Public Homo sapiens 9 OLFM1 24 110 108 CCDS HistoryNCBI Gene:10439Re-query CCDS DB by CCDS ID:65183.1Re-query CCDS DB by GeneID:10439See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65183.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371796.7 ENSP00000360861.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371796.7Link to Ensembl Protein Viewer:ENSP00000360861.3Re-query CCDS DB by Nucleotide ID:ENST00000371796Re-query CCDS DB by Protein ID:ENSP00000360861
Original member Current member NCBI NM_001282612.1 NP_001269541.1 Accepted alive Link to Nucleotide Sequence:NM_001282612.1Link to Protein Sequence:NP_001269541.1Re-query CCDS DB by Nucleotide ID:NM_001282612Re-query CCDS DB by Protein ID:NP_001269541Link to BLAST:NP_001269541.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269541.1 458 Q99784-5 458 100% 0 0

Chromosomal Locations for CCDS 65183.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 135087374 135087442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135090195 135090344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135095864 135096019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135098286 135098505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135106749 135106855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135119504 135120178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1377 nt):
ATGGGAGAAGCCCCGGGACGGGAGGGCCGCGGGCCGTGCCCCCAGCTGGAGTCCCCGCGCCGCCGCCGGG
TGCTGCCCACCAACCCTGAGGAGAGCTGGCAGGTGTACAGCTCTGCCCAGGACAGCGAGGGCAGGTGTAT
CTGCACAGTGGTCGCTCCACAGCAGACCATGTGTTCACGGGATGCCCGCACAAAACAGCTGAGGCAGCTA
CTGGAGAAGGTGCAGAACATGTCTCAATCCATAGAGGTCTTGGACAGGCGGACCCAGAGAGACTTGCAGT
ACGTGGAGAAGATGGAGAACCAAATGAAAGGACTGGAGTCCAAGTTCAAACAGGTGGAGGAGAGTCATAA
GCAACACCTGGCCAGGCAGTTTAAGGCGATAAAAGCGAAAATGGATGAACTTAGGCCTTTGATACCTGTG
TTGGAAGAGTACAAGGCCGATGCCAAATTGGTATTGCAGTTTAAAGAGGAGGTCCAGAATCTGACGTCAG
TGCTTAACGAGCTGCAAGAGGAAATTGGCGCCTATGACTACGATGAACTTCAGAGCAGAGTGTCCAATCT
TGAAGAAAGGCTCCGTGCATGCATGCAAAAACTAGCTTGCGGGAAGTTGACGGGCATCAGTGACCCCGTG
ACTGTCAAGACCTCCGGCTCGAGGTTCGGATCCTGGATGACAGACCCTCTCGCCCCTGAAGGCGATAACC
GGGTGTGGTACATGGACGGCTATCACAACAACCGCTTCGTACGTGAGTACAAGTCCATGGTTGACTTCAT
GAACACGGACAATTTCACCTCCCACCGTCTCCCCCACCCCTGGTCGGGCACGGGGCAGGTGGTCTACAAC
GGTTCTATCTACTTCAACAAGTTCCAGAGCCACATCATCATCAGGTTTGACCTGAAGACAGAGACCATCC
TCAAGACCCGCAGCCTGGACTATGCCGGTTACAACAACATGTACCACTACGCCTGGGGTGGCCACTCGGA
CATCGACCTCATGGTGGACGAGAGCGGGCTGTGGGCCGTGTACGCCACCAACCAGAACGCTGGCAACATC
GTGGTCAGTAGGCTGGACCCCGTGTCCCTGCAGACCCTGCAGACCTGGAACACGAGCTACCCCAAGCGCA
GCGCCGGGGAGGCCTTCATCATCTGCGGCACGCTGTACGTCACCAACGGCTACTCAGGGGGTACCAAGGT
CCACTATGCATACCAGACCAATGCCTCCACCTATGAATACATCGACATCCCATTCCAGAACAAATACTCC
CACATCTCCATGCTGGACTACAACCCCAAGGACCGGGCCCTGTATGCCTGGAACAACGGCCACCAGATCC
TCTACAACGTGACCCTCTTCCACGTCATCCGCTCCGACGAGTTGTAG

Translation (458 aa):
MGEAPGREGRGPCPQLESPRRRRVLPTNPEESWQVYSSAQDSEGRCICTVVAPQQTMCSRDARTKQLRQL
LEKVQNMSQSIEVLDRRTQRDLQYVEKMENQMKGLESKFKQVEESHKQHLARQFKAIKAKMDELRPLIPV
LEEYKADAKLVLQFKEEVQNLTSVLNELQEEIGAYDYDELQSRVSNLEERLRACMQKLACGKLTGISDPV
TVKTSGSRFGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNFTSHRLPHPWSGTGQVVYN
GSIYFNKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDESGLWAVYATNQNAGNI
VVSRLDPVSLQTLQTWNTSYPKRSAGEAFIICGTLYVTNGYSGGTKVHYAYQTNASTYEYIDIPFQNKYS
HISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRSDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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