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Report for CCDS64969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64969.1 Public Homo sapiens 8 MTSS1 24 110 108 CCDS HistoryNCBI Gene:9788Re-query CCDS DB by CCDS ID:64969.1Re-query CCDS DB by GeneID:9788See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325064.9 ENSP00000322804.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325064.9Link to Ensembl Protein Viewer:ENSP00000322804.5Re-query CCDS DB by Nucleotide ID:ENST00000325064Re-query CCDS DB by Protein ID:ENSP00000322804
Original member Current member NCBI NM_001282971.2 NP_001269900.1 Accepted alive Link to Nucleotide Sequence:NM_001282971.2Link to Protein Sequence:NP_001269900.1Re-query CCDS DB by Nucleotide ID:NM_001282971Re-query CCDS DB by Protein ID:NP_001269900Link to BLAST:NP_001269900.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269900.1 759 O43312-5 759 100% 0 0

Chromosomal Locations for CCDS 64969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124552992 124553692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124555742 124555904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124556232 124556405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124557681 124557875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124562782 124562992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124565662 124565759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124567071 124567178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124568379 124568536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124580551 124580562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124585087 124585161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124589620 124589711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124591151 124591235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124699526 124699599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124704130 124704191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124727884 124727955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2280 nt):
ATGGAGGCTGTGATTGAGAAGGAATGCAGCGCGCTCGGAGGCCTCTTCCAGACCATCATCAGCGACATGA
AGGGGAGCTATCCAGTTTGGGAAGATTTCATAAACAAAGCAGGAAAGCTGCAGTCCCAGCTTCGGACAAC
AGTAGTAGCAGCAGCTGCCTTCTTGGACGCCTTTCAGAAAGTGGCTGACATGGCCACCAACACACGTGGT
GGGACCAGGGAGATTGGATCTGCTCTCACCAGGATGTGCATGAGGCACAGAAGCATTGAAGCCAAGCTGA
GGCAGTTTTCGAGCGCTTTAATTGATTGTCTGATAAACCCACTTCAAGAACAGATGGAAGAATGGAAGAA
AGTGGCCAACCAGCTGGATAAAGACCACGCAAAAGAATATAAGAAAGCCCGCCAAGAGATAAAAAAGAAG
TCCTCGGATACGCTGAAACTGCAGAAGAAAGCAAAAAAAGTGGACACTCTTGGGAGAGGTGATATCCAGC
CTCAGTTGGACAGTGCTCTCCAAGATGTCAATGATAAGTATCTCTTATTGGAAGAAACAGAAAAGCAGGC
TGTCCGGAAGGCTTTGATTGAAGAACGTGGCCGATTCTGTACCTTCATCTCTATGCTGCGGCCAGTGATT
GAAGAAGAAATCTCAATGCTAGGGGAAATAACCCACCTTCAGACCATCTCGGAAGATCTAAAAAGCCTGA
CCATGGACCCTCACAAACTGCCCTCCTCAAGTGAACAGGTGATTCTGGACTTGAAAGGTTCTGATTACAG
CTGGTCGTATCAGACGCCACCCTCTTCCCCCAGCACCACCATGTCCAGAAAGTCCAGTGTCTGCAGCAGC
CTGAACAGTGTCAACAGCAGTGACTCCCGGTCCAGCGGCTCCCACTCGCATTCCCCCAGCTCACATTACC
GCTACCGCAGCTCCAACCTGGCCCAGCAGGCTCCTGTGAGGCTGTCCAGCGTGTCCTCCCATGACTCAGG
ATTCATATCCCAGGATGCCTTCCAGTCCAAGTCACCATCCCCCATGCCGCCAGAGGCCCCCAACCAGTTG
TCTAACGGGTTTTCTCACTATAGTTTATCAAGTGAGTCCCACGTGGGGCCCACGGGTGCAGGCCTTTTCC
CTCATTGCCTGCCTGCCTCCCGCCTGCTCCCTCGGGTCACCTCTGTCCACCTTCCAGACTACGCTCATTA
TTACACCATTGGGCCCGGCATGTTCCCGTCATCTCAGATCCCTAGCTGGAAGGACTGGGCTAAGCCTGGG
CCCTATGACCAGCCTCTGGTGAACACCCTGCAGCGCCGCAAAGAGAAGCGAGAACCGGACCCCAACGGGG
GAGGACCCACTACCGCCAGCGGCCCACCTGCAGCAGCTGAGGAGGCTCAGAGACCACGGAGCATGACTGT
ATCGGCTGCCACCAGGCCTGGTGAGGAGATGGAGGCTTGTGAGGAGCTGGCCCTGGCCCTGTCTCGGGGC
CTGCAGCTGGACACCCAGAGGAGCAGCCGGGACTCGCTTCAGTGCTCCAGCGGCTACAGCACCCAGACAA
CCACCCCCTGCTGCTCTGAGGACACCATCCCTTCCCAAGTTTCAGATTATGATTATTTCTCTGTAAGTGG
TGACCAGGAGGCAGATCAGCAGGAGTTCGACAAGTCCTCCACCATTCCAAGAAACAGCGACATCAGCCAG
TCCTACCGACGGATGTTCCAAGCCAAGCGTCCAGCCTCAACTGCTGGCCTCCCCACCACCCTGGGACCTG
CTATGGTCACTCCAGGGGTTGCAACTATCCGACGGACCCCTTCCACCAAGCCTTCTGTCCGCCGGGGAAC
CATTGGAGCTGGTCCCATCCCCATCAAGACACCCGTGATCCCTGTCAAGACCCCAACCGTCCCAGACCTC
CCAGGGGTGTTGCCAGCCCCTCCAGATGGGCCAGAAGAGCGGGGGGAGCACAGCCCTGAGTCGCCATCTG
TGGGTGAGGGCCCCCAAGGTGTCACCAGCATGCCCTCCTCAATGTGGAGCGGCCAAGCTTCCGTTAACCC
TCCACTTCCAGGCCCGAAGCCCAGTATCCCTGAGGAGCACAGACAGGCAATTCCAGAAAGTGAAGCTGAA
GACCAGGAACGGGAACCCCCAAGTGCCACTGTCTCCCCAGGCCAGATTCCAGAGAGTGACCCTGCAGACC
TGAGCCCAAGGGATACTCCACAAGGAGAAGACATGCTGAACGCCATCCGAAGGGGCGTGAAACTGAAGAA
GACCACGACAAACGATCGCTCAGCCCCTCGCTTTTCTTAG

Translation (759 aa):
MEAVIEKECSALGGLFQTIISDMKGSYPVWEDFINKAGKLQSQLRTTVVAAAAFLDAFQKVADMATNTRG
GTREIGSALTRMCMRHRSIEAKLRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKARQEIKKK
SSDTLKLQKKAKKVDTLGRGDIQPQLDSALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISMLRPVI
EEEISMLGEITHLQTISEDLKSLTMDPHKLPSSSEQVILDLKGSDYSWSYQTPPSSPSTTMSRKSSVCSS
LNSVNSSDSRSSGSHSHSPSSHYRYRSSNLAQQAPVRLSSVSSHDSGFISQDAFQSKSPSPMPPEAPNQL
SNGFSHYSLSSESHVGPTGAGLFPHCLPASRLLPRVTSVHLPDYAHYYTIGPGMFPSSQIPSWKDWAKPG
PYDQPLVNTLQRRKEKREPDPNGGGPTTASGPPAAAEEAQRPRSMTVSAATRPGEEMEACEELALALSRG
LQLDTQRSSRDSLQCSSGYSTQTTTPCCSEDTIPSQVSDYDYFSVSGDQEADQQEFDKSSTIPRNSDISQ
SYRRMFQAKRPASTAGLPTTLGPAMVTPGVATIRRTPSTKPSVRRGTIGAGPIPIKTPVIPVKTPTVPDL
PGVLPAPPDGPEERGEHSPESPSVGEGPQGVTSMPSSMWSGQASVNPPLPGPKPSIPEEHRQAIPESEAE
DQEREPPSATVSPGQIPESDPADLSPRDTPQGEDMLNAIRRGVKLKKTTTNDRSAPRFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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