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Report for CCDS6489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6489.1 Public Homo sapiens 9 HAUS6 24 110 108 CCDS HistoryNCBI Gene:54801Re-query CCDS DB by CCDS ID:6489.1Re-query CCDS DB by GeneID:54801See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380502.8 ENSP00000369871.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380502.8Link to Ensembl Protein Viewer:ENSP00000369871.3Re-query CCDS DB by Nucleotide ID:ENST00000380502Re-query CCDS DB by Protein ID:ENSP00000369871
Original member Current member NCBI NM_017645.5 NP_060115.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017645.5Link to Protein Sequence:NP_060115.3Re-query CCDS DB by Nucleotide ID:NM_017645Re-query CCDS DB by Protein ID:NP_060115Link to BLAST:NP_060115.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060115.3 955 Q7Z4H7-1 955 100% 0 0

Chromosomal Locations for CCDS 6489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 19056343 19056404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19057961 19059001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19060088 19060223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19063008 19063193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19063514 19063580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19070219 19070300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19076602 19076704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19078176 19078302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19080479 19080672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19082873 19083043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19086734 19086782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19087091 19087156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19089412 19089559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19093171 19093303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19094317 19094395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19096674 19096769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 19102524 19102651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2868 nt):
ATGAGCTCGGCCTCGGTCACCGCTTTCGAGAAGGAGCATCTCTGGATGTATCTGCAGGCGCTCGGCTTCG
AGCCAGGCCCGGCAACCATTGCCTGCGGAAAGATCGTGTCGCACACGCACCTCGGAGTGAACATGTTTGA
CAAGCTGAACCGTGATGCCTTTCATATAATTTCTTATTTTTTGTTTCAAGTTCTGGACCAGTCTCTCACC
AAAGAAGTTTTCAAATTTTGTTGGCCCCCATTTGACCAAAAAAGTGACACTGAATTCCGAAAACATTGCT
GTGAATGGATAAAAAGGATTTCTGGTGAATGTGGAAGTAGCTTTCCTCAAGTTGTTGGTTCACTATTTCT
TTCTCCTGGTGGTCCTAAGTTTATTCATCTGATGTATCATTTTGCAAGATTTGTTGCAATGAAATATATT
AAATCCAATTCTAAAAATTCTTCTCATCATTTTGTAGAGACATTTAACATAAAACCACAGGACTTGCACA
AATGCATTGCCAGATGCCATTTCGCACGTAGCAGATTTTTACAAATTTTGCAAAGACAAGATTGTGTTAC
CCAAAAATATCAGGAAAATGCACAATTATCAGTTAAGCAGGTACGAAACTTGAGATCTGAATGTATAGGA
TTGGAAAACCAAATAAAGAAAATGGAACCCTATGATGACCACAGTAATATGGAAGAAAAAATTCAAAAGG
TTCGGTCTTTGTGGGCTTCAGTGAATGAAACGCTCATGTTTTTGGAAAAAGAGAGAGAAGTTGTTAGTTC
GGTCCTTAGTCTTGTTAACCAATATGCTTTAGATGGAACTAATGTTGCTATTAATATTCCAAGGCTCTTA
CTTGACAAAATTGAGAAACAAATGTTTCAGTTGCACATAGGAAATGTTTATGAGGCTGGAAAACTGAACC
TCTTAACAGTTATTCAGTTATTAAATGAAGTCTTGAAGGTGATGAAATATGAACGTTGTCAGGCTGATCA
AGCAAGATTGACGGTAGACCTTCACTACCTTGAAAAAGAGACCAAATTTCAGAAGGAAAGATTATCAGAT
CTGAAACATATGAGGTATAGAATAAAAGATGATCTCACAACTATAAGACATTCTGTTGTTGAAAAGCAAG
GAGAATGGCATAAAAAGTGGAAAGAATTTCTTGGTTTGTCTCCTTTCAGTCTAATTAAAGGTTGGACTCC
ATCTGTAGATCTTTTACCACCAATGTCTCCCCTTTCGTTTGATCCTGCCTCAGAAGAAGTGTATGCAAAG
AGTATTCTTTGTCAGTATCCTGCTTCACTTCCAGATGCACATAAGCAACATAACCAAGAAAATGGTTGCA
GAGGAGACAGTGATACCTTGGGAGCGCTACATGATCTAGCCAACAGCCCTGCCTCTTTCTTGTCGCAGTC
AGTTTCATCATCAGATAGAAACAGTGTTACAGTACTTGAAAAGGACACAAAGATGGGAACTCCCAAAGAA
AAAAATGAAGCAATTTCTAAGAAAATACCAGAATTTGAAGTGGAAAATTCTCCATTATCAGATGTTGCAA
AGAATACAGAGAGTAGTGCATTTGGAGGGTCTTTGCCAGCTAAAAAAAGTGATCCATTTCAAAAAGAGCA
AGATCATCTGGTAGAAGAGGTTGCCAGAGCAGTTTTATCTGATTCACCACAGCTCTCTGAAGGAAAAGAA
ATAAAATTAGAGGAACTAATTGACTCTCTGGGTTCTAACCCCTTCTTAACAAGGAATCAGATTCCCCGTA
CTCCAGAAAACTTGATAACTGAAATTAGGAGCTCATGGAGAAAAGCTATTGAAATGGAAGAAAACAGAAC
TAAAGAACCAATTCAAATGGATGCTGAACATAGAGAAGTATTGCCAGAATCATTACCTGTGTTGCACAAT
CAAAGAGAATTTAGCATGGCTGATTTTCTCTTAGAAACCACTGTATCAGATTTTGGCCAGTCTCATTTGA
CTGAAGAGAAAGTTATTTCAGATTGCGAGTGTGTGCCTCAGAAACATGTGCTGACCAGTCACATAGATGA
ACCACCAACACAAAATCAGTCAGATTTGTTAAATAAGAAAGTAATTTGCAAGCAAGATTTGGAATGTTTA
GCCTTCACCAAGCTTTCAGAAACTAGCCGAATGGAGACATTCTCCCCTGCTGTCGGCAATAGGATAGATG
TGATGGGTGGCAGTGAAGAGGAGTTTATGAAAATATTGGACCACTTAGAAGTTTCTTGTAACAAACCTTC
CACAAATAAAACTATGTTGTGGAATTCTTTTCAGATATCAAGTGGAATTAGTTCTAAGAGTTTTAAAGAT
AATGATTTTGGCATATTACACGAAACTCTCCCGGAAGAAGTTGGTCATCTAAGTTTTAATAGTTCCAGTA
GTTCAGAGGCCAATTTTAAACTGGAGCCAAATAGTCCTATGCATGGTGGCACTCTTCTAGAAGATGTTGT
GGGAGGGAGACAGACTACTCCAGAATCAGACTTTAATTTACAGGCTCTTCGCAGTAGATACGAGGCTCTG
AAGAAATCTCTTTCCAAGAAAAGGGAAGAATCTTACCTCTCGAATTCCCAAACACCCGAAAGACACAAAC
CAGAATTGAGCCCTACTCCCCAAAATGTACAAACAGATGATACGCTTAACTTTTTGGACACCTGTGATTT
GCATACTGAGCATATAAAGCCATCTTTACGCACGTCCATCGGTGAAAGAAAACGGTCTCTTTCACCACTA
ATTAAGTTTTCTCCAGTGGAACAAAGATTGAGAACCACAATAGCATGTAGTCTTGGAGAACTACCTAATT
TAAAGGAAGAAGACATTTTGAATAAGAGCCTTGATGCAAAAGAACCACCGTCTGACTTGACAAGATGA

Translation (955 aa):
MSSASVTAFEKEHLWMYLQALGFEPGPATIACGKIVSHTHLGVNMFDKLNRDAFHIISYFLFQVLDQSLT
KEVFKFCWPPFDQKSDTEFRKHCCEWIKRISGECGSSFPQVVGSLFLSPGGPKFIHLMYHFARFVAMKYI
KSNSKNSSHHFVETFNIKPQDLHKCIARCHFARSRFLQILQRQDCVTQKYQENAQLSVKQVRNLRSECIG
LENQIKKMEPYDDHSNMEEKIQKVRSLWASVNETLMFLEKEREVVSSVLSLVNQYALDGTNVAINIPRLL
LDKIEKQMFQLHIGNVYEAGKLNLLTVIQLLNEVLKVMKYERCQADQARLTVDLHYLEKETKFQKERLSD
LKHMRYRIKDDLTTIRHSVVEKQGEWHKKWKEFLGLSPFSLIKGWTPSVDLLPPMSPLSFDPASEEVYAK
SILCQYPASLPDAHKQHNQENGCRGDSDTLGALHDLANSPASFLSQSVSSSDRNSVTVLEKDTKMGTPKE
KNEAISKKIPEFEVENSPLSDVAKNTESSAFGGSLPAKKSDPFQKEQDHLVEEVARAVLSDSPQLSEGKE
IKLEELIDSLGSNPFLTRNQIPRTPENLITEIRSSWRKAIEMEENRTKEPIQMDAEHREVLPESLPVLHN
QREFSMADFLLETTVSDFGQSHLTEEKVISDCECVPQKHVLTSHIDEPPTQNQSDLLNKKVICKQDLECL
AFTKLSETSRMETFSPAVGNRIDVMGGSEEEFMKILDHLEVSCNKPSTNKTMLWNSFQISSGISSKSFKD
NDFGILHETLPEEVGHLSFNSSSSSEANFKLEPNSPMHGGTLLEDVVGGRQTTPESDFNLQALRSRYEAL
KKSLSKKREESYLSNSQTPERHKPELSPTPQNVQTDDTLNFLDTCDLHTEHIKPSLRTSIGERKRSLSPL
IKFSPVEQRLRTTIACSLGELPNLKEEDILNKSLDAKEPPSDLTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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