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Report for CCDS648.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
648.2 Public Homo sapiens 1 ANKRD13C 24 110 108 CCDS HistoryNCBI Gene:81573Re-query CCDS DB by CCDS ID:648.2Re-query CCDS DB by GeneID:81573See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 648.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370944.9 ENSP00000359982.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370944.9Link to Ensembl Protein Viewer:ENSP00000359982.4Re-query CCDS DB by Nucleotide ID:ENST00000370944Re-query CCDS DB by Protein ID:ENSP00000359982
Original member Current member NCBI NM_030816.5 NP_110443.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030816.5Link to Protein Sequence:NP_110443.3Re-query CCDS DB by Nucleotide ID:NM_030816Re-query CCDS DB by Protein ID:NP_110443Link to BLAST:NP_110443.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110443.3 541 Q8N6S4-1 541 100% 0 0

Chromosomal Locations for CCDS 648.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 70262717 70262847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70270856 70270956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70274720 70274818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70276765 70276844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70292388 70292549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70296130 70296261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70300764 70300908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70306224 70306290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70313745 70313790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70315481 70315566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70324853 70324957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70336058 70336099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70353979 70354408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1626 nt):
ATGACCGGGGAGAAGATCCGCTCACTGCGGAGGGACCACAAGCCCAGCAAAGAAGAAGGGGACCTGCTGG
AGCCCGGGGATGAGGAAGCGGCGGCTGCCCTCGGCGGTACCTTTACCAGAAGCAGGATTGGCAAGGGCGG
CAAAGCTTGTCATAAGATCTTCAGTAACCATCACCACCGGCTACAGCTGAAGGCAGCTCCGGCCTCCTCC
AATCCCCCCGGCGCCCCGGCTCTGCCGCTGCACAATTCCTCCGTGACTGCCAACTCCCAGTCCCCGGCCC
TTCTGGCCGGCACCAACCCCGTTGCTGTCGTCGCGGATGGAGGCAGTTGCCCCGCACACTACCCGGTGCA
CGAGTGCGTCTTCAAGGGGGATGTGAGGAGACTCTCCTCTCTCATCCGCACGCACAATATCGGGCAGAAA
GATAATCACGGAAATACTCCTTTACACCTTGCTGTGATGTTAGGAAATAAAGAATGTGCCCATTTACTTT
TGGCTCACAATGCTCCAGTCAAGGTGAAAAATGCTCAGGGATGGAGCCCTCTGGCGGAAGCCATCAGCTA
TGGAGATAGGCAGATGATTACAGCTCTTTTGAGGAAGCTTAAGCAGCAATCCAGGGAAAGTGTTGAAGAA
AAACGACCTCGATTATTAAAAGCCCTGAAAGAGCTAGGTGACTTTTATCTAGAACTTCACTGGGATTTTC
AAAGCTGGGTGCCTTTACTTTCCCGAATTCTGCCTTCCGATGCATGTAAAATATACAAACAAGGTATCAA
TATCAGGCTTGACACAACTCTCATAGACTTTACTGACATGAAGTGCCAACGAGGGGATCTAAGCTTCATT
TTCAATGGGGATGCGGCGCCCTCTGAATCTTTTGTAGTATTAGACAATGAACAAAAAGTTTATCAGCGAA
TACATCATGAGGAATCAGAGATGGAAACAGAAGAAGAGGTGGATATTTTAATGAGCAGTGATATTTACTC
TGCAACTTTATCAACAAAATCAATTTCTTTCACGCGTGCCCAGACAGGATGGCTTTTTCGGGAAGATAAA
ACAGAAAGAGTAGGAAACTTTTTGGCAGACTTTTACCTGGTGAATGGACTTGTTTTAGAATCAAGGAAAA
GAAGAGAACATCTCAGTGAAGAGGATATTCTTCGAAATAAGGCCATCATGGAGAGTTTGAGTAAAGGTGG
AAACATAATGGAACAGAATTTTGAGCCGATTCGAAGACAGTCTCTTACACCTCCTCCTCAGAACACTATT
ACATGGGAAGAATATATATCTGCTGAAAATGGAAAAGCTCCTCATCTGGGTAGAGAATTGGTGTGCAAAG
AGAGTAAGAAAACGTTTAAAGCTACGATAGCCATGAGCCAGGAATTTCCCTTAGGGATAGAGTTATTATT
GAATGTTTTAGAAGTAGTAGCTCCCTTCAAGCACTTTAACAAGCTTAGAGAATTTGTTCAGATGAAGCTT
CCTCCAGGCTTTCCTGTAAAATTAGATATACCTGTGTTTCCCACAATCACAGCCACTGTGACTTTTCAGG
AGTTTCGATACGATGAATTTGATGGCTCCATCTTTACTATACCTGATGACTACAAGGAAGACCCAAGCCG
TTTTCCTGATCTTTAA

Translation (541 aa):
MTGEKIRSLRRDHKPSKEEGDLLEPGDEEAAAALGGTFTRSRIGKGGKACHKIFSNHHHRLQLKAAPASS
NPPGAPALPLHNSSVTANSQSPALLAGTNPVAVVADGGSCPAHYPVHECVFKGDVRRLSSLIRTHNIGQK
DNHGNTPLHLAVMLGNKECAHLLLAHNAPVKVKNAQGWSPLAEAISYGDRQMITALLRKLKQQSRESVEE
KRPRLLKALKELGDFYLELHWDFQSWVPLLSRILPSDACKIYKQGINIRLDTTLIDFTDMKCQRGDLSFI
FNGDAAPSESFVVLDNEQKVYQRIHHEESEMETEEEVDILMSSDIYSATLSTKSISFTRAQTGWLFREDK
TERVGNFLADFYLVNGLVLESRKRREHLSEEDILRNKAIMESLSKGGNIMEQNFEPIRRQSLTPPPQNTI
TWEEYISAENGKAPHLGRELVCKESKKTFKATIAMSQEFPLGIELLLNVLEVVAPFKHFNKLREFVQMKL
PPGFPVKLDIPVFPTITATVTFQEFRYDEFDGSIFTIPDDYKEDPSRFPDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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