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Report for CCDS64790.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64790.1 Public Homo sapiens 7 CTAGE6 24 110 108 CCDS HistoryNCBI Gene:340307Re-query CCDS DB by CCDS ID:64790.1Re-query CCDS DB by GeneID:340307See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64790.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000470691.2 ENSP00000474388.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000470691.2Link to Ensembl Protein Viewer:ENSP00000474388.1Re-query CCDS DB by Nucleotide ID:ENST00000470691Re-query CCDS DB by Protein ID:ENSP00000474388
Original member Current member NCBI NM_178561.5 NP_848656.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178561.5Link to Protein Sequence:NP_848656.2Re-query CCDS DB by Nucleotide ID:NM_178561Re-query CCDS DB by Protein ID:NP_848656Link to BLAST:NP_848656.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848656.2 777 Q86UF2 777 100% 0 0

Chromosomal Locations for CCDS 64790.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 143755325 143757658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2334 nt):
ATGGAGGAGCCTGGTGCTACCCCTCAGCCCTACCTGGGGCTGGTCCTGGAGGAGCTACGCAGAGTTGTGG
CAGCACTACCTGAGAGTATGAGACCAGATGAGAATCCTTATGGTTTTCCATCGGAACTGGTGGTATGTGC
AGCTGTTATTGGATTTTTTGTTGTTCTCCTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTT
TACGTGGGAAGAGAGCAAAAACTTGGTGCAACGCTTTCTGGACTAATTGAAGAAAAATGTAAACTACTTG
AAAAGTTTAGCCTTATTCAAAAAGAGTATGAAGGCTATGAAGTAGAGTCATCTTTAGAGGATGCCAGCTT
TGAGAAGGCGGCAGCAGAAGAAGCACGAAGTTTGGAGGCAACCTGTGAAAAGCTGAACAGGTCCAATTCT
GAACTTGAGGATGAAATCCTCTGTCTAGAAAAAGACTTAAAAGAAGAGAAATCTAAACATTCTCAACAAG
ATGAATTGATGGCGGATATTTCAAAAAGTATACAGTCTCTAGAAGATGAGTCAAAATCCCTCAAATCACA
AATAGCTGAAGCCAAAATCATCTGCAAGACATTTAAAATGAGTGAAGAACGACGGGCTATAGCAATAAAA
GATGCTTTGAATGAAAATTCTCAACTTCAGACAAGCCATAAACAGCTTTTTCAGCAAGAAGCTGAAGTAT
GGAAAGGAGAAGTGAGTGAACTTAATAAACAGAAAATAACATTTGAAGACTCCAAAGTACACGCAGAACA
AGTTCTGAATGATAAAGAAAATCACATCAAGACCCTGACTGGACACTTGCCAATGATGAAAGATCAGGCT
GCTGTGCTTGAAGAAGACACAACGGATGATGATAACCTGGAATTAGAAGTGAACAGTCAATGGGAAAATG
GTGCTAACTTAGATGATCCTCTGAAAGGAGCTTTGAAGAAACTGATTCATGCTGCTAAGTTAAATGTTTC
TTTAAAAAGCTTAGAAGGAGAAAGAAACCACATTATTATTCAGTTATCTGAAGTGGACAAAACAAAGGAA
GAGCTTACAGAGCATATTAAAAATCTTCAGACTCAACAAGAATCTTTGCAATCAGAAAACATATATTTTG
AAAGTGAGAATCAGAAGCTTCAACAGAAACTTAAAATAATGACTGAATTCTATCAAGAAGATGAAATGAA
ACTCTATAGGAAATTAACAGTGGAGGAAAATTACCGAATAGAGGAAGAAGAGAAGCTTTCTAAAGTGGAA
GAAAAGCTCAGCCGTGCCACTGAACAGCTGGAGACCTATAGAAAGCTAGCCAAAGATCTTGAAGAAGAAT
TGGAGAGAACTGTTCATTTTTATCAAAAGCAGGTTATTTCCTACGAGAAAAGAGGACATGATAATTGGTT
GGCAGCTCGGACTGCTGAAAGAAACCTCAGTGATTTAAGGAAAGAAAATGCTCACAACAAACAAAAATTA
ACTGAAACAGAGTTGAAATTTGAACTTTTAGAAAAAGATCCTAATGCACTTGATGTTTCAAATACAGCAT
TTGGCAGAGAGCATGCCCCGAATGGTCCCGCACCATTGGGTCAGCGTTCATCTGAAACGAGAGCTTTTCT
CTCTCCTCAAACTTTGTTGGAGGATCCACTGGGACTCTCACCTGTGCTTCCGGAGGGAGGAGGAAGAGGC
CCAAGAGGCCCAGGGAATCCCCTGGACCATCAGATTACCAATGAAAGAGGAGAACCAAGCTGTGACAGGT
TAACCGATCCTCACAGGGCTCCTTCTGACACTGGGTCCCTGTCATCTCCGGTGGAACAGGACTGTAAGAT
GATGTTTCCTCCACCAGGACAATCATATCCTGATTCAGCTCTTCCTCCTCAAAGGGAAGACAGATTTTAT
TCTAATTCTGAAAGACTGTCTGGATCAGCAGAACCCAGAAGTTTTAAAATGACTTCTTTGGATAAAATGG
ATGGGTCAATGCCTTCAGAAATGGAATCCAGTAGAAATGATGCCAAAGATGATCTTGGTAATTTAAATGT
GCCTGATTCATCTCTCCCTGCTGAAAATGAAGCAACTGGCCCTGGCTTTATTCCTCCACCTCTTGCTCCA
GTCAGAGGACCATTGTTTCCAGTGGATACAAGGGGCCCGTTCATGAGAAGAGGACCTCCTTTCCCCCCAC
CTCCTCCAGGAACCATGTTTGGAGCTTCTCGAGGTTATTTTCCACCAAGGGATTTCCCAGGTCCACCACA
TGCTCCATTTGCAATGAGAAACATCTACCCACCGAGGGGTTTACCTCCTTACTTTCACCCGAGACCTGGA
TTTTACCCCAACCCCGCATTCTGA

Translation (777 aa):
MEEPGATPQPYLGLVLEELRRVVAALPESMRPDENPYGFPSELVVCAAVIGFFVVLLFLWRSFRSVRSRL
YVGREQKLGATLSGLIEEKCKLLEKFSLIQKEYEGYEVESSLEDASFEKAAAEEARSLEATCEKLNRSNS
ELEDEILCLEKDLKEEKSKHSQQDELMADISKSIQSLEDESKSLKSQIAEAKIICKTFKMSEERRAIAIK
DALNENSQLQTSHKQLFQQEAEVWKGEVSELNKQKITFEDSKVHAEQVLNDKENHIKTLTGHLPMMKDQA
AVLEEDTTDDDNLELEVNSQWENGANLDDPLKGALKKLIHAAKLNVSLKSLEGERNHIIIQLSEVDKTKE
ELTEHIKNLQTQQESLQSENIYFESENQKLQQKLKIMTEFYQEDEMKLYRKLTVEENYRIEEEEKLSKVE
EKLSRATEQLETYRKLAKDLEEELERTVHFYQKQVISYEKRGHDNWLAARTAERNLSDLRKENAHNKQKL
TETELKFELLEKDPNALDVSNTAFGREHAPNGPAPLGQRSSETRAFLSPQTLLEDPLGLSPVLPEGGGRG
PRGPGNPLDHQITNERGEPSCDRLTDPHRAPSDTGSLSSPVEQDCKMMFPPPGQSYPDSALPPQREDRFY
SNSERLSGSAEPRSFKMTSLDKMDGSMPSEMESSRNDAKDDLGNLNVPDSSLPAENEATGPGFIPPPLAP
VRGPLFPVDTRGPFMRRGPPFPPPPPGTMFGASRGYFPPRDFPGPPHAPFAMRNIYPPRGLPPYFHPRPG
FYPNPAF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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