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Report for CCDS64635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64635.1 Public Homo sapiens 7 POLM 24 110 108 CCDS HistoryNCBI Gene:27434Re-query CCDS DB by CCDS ID:64635.1Re-query CCDS DB by GeneID:27434See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335195.10 ENSP00000335141.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335195.10Link to Ensembl Protein Viewer:ENSP00000335141.6Re-query CCDS DB by Nucleotide ID:ENST00000335195Re-query CCDS DB by Protein ID:ENSP00000335141
Original member Current member NCBI NM_001284331.2 NP_001271260.1 Accepted alive Link to Nucleotide Sequence:NM_001284331.2Link to Protein Sequence:NP_001271260.1Re-query CCDS DB by Nucleotide ID:NM_001284331Re-query CCDS DB by Protein ID:NP_001271260Link to BLAST:NP_001271260.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271260.1 457 Q9NP87-2 457 100% 0 0

Chromosomal Locations for CCDS 64635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44073291 44073377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44073625 44073708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44073783 44074025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44074398 44074522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44076509 44076629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44078740 44078811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44079571 44079741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44079861 44079959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44080733 44080916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44082251 44082438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGCTCCCCAAACGGCGGCGAGCGCGGGTCGGGTCCCCTAGCGGCGATGCCGCTTCCTCCACGCCGCCCT
CGACGCGCTTCCCGGGAGTCGCCATCTACCTGGTCGAGCCTCGCATGGGTCGCAGCCGCCGGGCCTTCCT
CACAGGCCTGGCGCGCTCCAAAGGCTTCCGCGTCCTTGACGCCTGCAGCTCCGAAGCGACACATGTTGTG
ATGGAAGAGACCTCAGCAGAGGAGGCCGTCAGCTGGCAGGAGCGCAGGATGGCAGCTGCTCCCCCGGGTT
GCACCCCCCCAGCTCTGCTGGACATAAGCTGGTTAACAGAGAGCCTGGGAGCTGGGCAGCCTGTACCTGT
GGAGTGCCGGCACCGCCTGGAGGTGGCTGGGCCAAGGAAGGGGCCTCTGAGCCCAGCATGGATGCCTGCC
TATGCCTGCCAGCGCCCTACGCCCCTCACACACCACAACACTGGCCTCTCCGAGGCTCTGGAGATACTGG
CCGAGGCAGCAGGCTTTGAAGGCAGTGAGGGCCGCCTCCTCACCTTCTGCAGAGCAGCCTCGGTGCTCAA
GGCCCTTCCCAGCCCTGTCACAACCCTGAGCCAGCTGCAGGGGCTTCCCCACTTTGGAGAACACTCCTCT
AGGGTTGTCCAGGAGCTGCTGGAGCATGGAGTGTGTGAGGAGGTGGAGAGAGTTCGGCGCTCAGAGAGGT
ACCAGACCATGAAGCTCTTCACCCAGATCTTCGGGGTCGGTGTGAAGACTGCTGACCGGTGGTACCGGGA
AGGACTGCGAACCTTAGATGACCTCCGAGAGCAGCCCCAGAAACTAACCCAACAGCAGAAAGCGGCACCA
CCAGGACCTGAGCACCCCAGTCCTGCGGTCCGATGTAGATGCCCTGCAGCAGGTGGTGGAGGAAGCTGTG
GGGCAGGCCCTGCCTGGGGCCACCGTCACGCTGACCGGCGGCTTCCGCAGGGCCTCATCCTGTACCACCA
GCACCAGCACAGCTGCTGTGAGTCCCCTACCCGCCTGGCCCAACAGAGCCACATGGACGCTTTTGAGAGA
AGTTTCTGCATTTTCCGCCTACCACAACCTCCAGGGGCTGCTGTGGGGGGATCCACGAGGCCCTGCCCAT
CCTGGAAGGCCGTGAGAGTGGACTTGGTAGTTGCACCCGTCAGCCAGTTCCCTTTCGCCCTGCTCGGTTG
GACTGGCTCCAAGCTTTTCCAGCGGGAGCTGCGCCGCTTCAGCCGGAAGGAGAAGGGCCTGTGGCTGAAC
AGCCATGGGCTGTTTGACCCGGAGCAGAAGACATTTTTCCAAGCGGCTTCAGAGGAAGACATCTTCAGAC
ACCTGGGCCTTGAGTACCTTCCTCCAGAGCAGAGAAACGCCTGA

Translation (457 aa):
MLPKRRRARVGSPSGDAASSTPPSTRFPGVAIYLVEPRMGRSRRAFLTGLARSKGFRVLDACSSEATHVV
MEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTESLGAGQPVPVECRHRLEVAGPRKGPLSPAWMPA
YACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEHSS
RVVQELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAAP
PGPEHPSPAVRCRCPAAGGGGSCGAGPAWGHRHADRRLPQGLILYHQHQHSCCESPTRLAQQSHMDAFER
SFCIFRLPQPPGAAVGGSTRPCPSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRFSRKEKGLWLN
SHGLFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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