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Report for CCDS6435.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6435.1 Public Homo sapiens 8 ZNF7 24 110 108 CCDS HistoryNCBI Gene:7553Re-query CCDS DB by CCDS ID:6435.1Re-query CCDS DB by GeneID:7553See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6435.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000532777.6 ENSP00000432641.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000532777.6Link to Ensembl Protein Viewer:ENSP00000432641.2Re-query CCDS DB by Nucleotide ID:ENST00000532777Re-query CCDS DB by Protein ID:ENSP00000432641
Original member Current member EBI ENST00000528372.5 ENSP00000432724.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528372.5Link to Ensembl Protein Viewer:ENSP00000432724.1Re-query CCDS DB by Nucleotide ID:ENST00000528372Re-query CCDS DB by Protein ID:ENSP00000432724
Original member Current member NCBI NM_003416.4 NP_003407.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003416.4Link to Protein Sequence:NP_003407.1Re-query CCDS DB by Nucleotide ID:NM_003416Re-query CCDS DB by Protein ID:NP_003407Link to BLAST:NP_003407.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003407.1 686 P17097-1 686 100% 0 0

Chromosomal Locations for CCDS 6435.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144829088 144829090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144829478 144829604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144837391 144837507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144841355 144843168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2061 nt):
ATGGAGGTGGTAACATTTGGCGATGTGGCTGTGCACTTCTCTCGGGAGGAGTGGCAGTGTCTGGACCCTG
GCCAGAGGGCCCTCTACAGGGAAGTGATGCTGGAGAACCACAGCAGTGTGGCTGGACTAGCAGGATTCCT
GGTTTTCAAGCCTGAGCTGATCTCTCGGCTGGAGCAGGGAGAAGAGCCATGGGTCCTCGACCTGCAGGGA
GCAGAGGGGACAGAGGCACCAAGGACCTCCAAGACAGATTCTACGATTAGGACTGAAAATGAGCAGGCCT
GTGAGGACATGGACATCCTAAAATCAGAATCCTATGGGACAGTGGTCAGAATCTCCCCACAGGACTTTCC
TCAGAATCCTGGCTTTGGAGACGTTTCTGATTCTGAGGTCTGGTTAGACAGTCATCTGGGCAGTCCCGGG
CTGAAAGTGACAGGCTTTACCTTCCAAAATAACTGTTTGAATGAGGAGACTGTGGTTCCCAAGACCTTCA
CCAAGGACGCACCCCAGGGATGTAAGGAGCTGGGAAGCAGCGGCCTGGATTGTCAGCCTCTTGAAAGTCA
GGGAGAGAGTGCGGAAGGGATGTCCCAGAGATGCGAGGAGTGTGGCAAAGGCATCAGAGCCACTTCAGAT
ATCGCTCTGCATTGGGAAATTAATACACAGAAAATTAGCAGATGTCAAGAATGCCAAAAAAAGTTATCTG
ACTGCTTGCAGGGGAAACATACAAATAACTGCCATGGAGAGAAGCCGTACGAATGTGCAGAGTGTGGGAA
AGTCTTCAGGCTCTGCTCGCAGCTTAATCAGCATCAGAGAATCCACACGGGAGAGAAACCCTTTAAATGC
ACTGAGTGTGGAAAAGCCTTCCGCCTGAGCTCAAAACTTATTCAGCATCAAAGAATCCACACTGGGGAGA
AGCCCTACAGATGTGAGGAATGTGGAAAAGCTTTTGGTCAGAGCTCAAGCCTCATCCACCATCAGAGAAT
CCACACAGGAGAGAGGCCCTATGGTTGTCGTGAGTGTGGGAAAGCCTTCAGCCAGCAGTCGCAGCTGGTT
AGACACCAGAGAACTCACACTGGGGAGAGGCCCTACCCTTGCAAGGAGTGTGGGAAGGCCTTCAGCCAGA
GCTCCACCCTAGCCCAGCATCAAAGGATGCATACTGGGGAGAAAGCTCAAATTCTAAAAGCCTCAGACAG
TCCAAGCCTTGTTGCACATCAGAGAATTCACGCTGTAGAGAAACCATTTAAGTGTGATGAGTGTGGGAAA
GCTTTTAGGTGGATCTCTCGCCTGAGTCAGCATCAGCTGATTCACACTGGAGAGAAGCCTTATAAATGCA
ACAAGTGTACAAAAGCCTTTGGTTGTAGTTCACGGCTTATTCGCCATCAGAGAACTCACACTGGAGAAAA
ACCATTTAAATGTGATGAGTGTGGCAAAGGCTTTGTTCAGGGCTCACACCTTATTCAGCATCAGCGAATC
CACACTGGAGAGAAACCCTATGTGTGTAATGACTGTGGAAAAGCCTTCAGTCAGAGTTCCAGCCTTATTT
ACCATCAGAGAATCCATAAAGGAGAGAAGCCCTACGAATGCCTCCAATGCGGAAAAGCCTTCAGTATGAG
CACACAGCTTACAATACATCAAAGGGTTCACACTGGAGAGAGGCCCTATAAATGTAATGAATGTGGGAAA
GCCTTCAGTCAAAACTCAACCCTTTTCCAACACCAGATAATTCATGCAGGGGTGAAGCCCTATGAGTGCA
GTGAGTGTGGAAAAGCCTTCAGCCGGAGCTCATATCTTATTGAACACCAGAGAATACACACTAGGGCCCA
GTGGTTTTACGAATATGGGAATGCCCTGGAAGGGTCCACCTTTGTGAGCCGTAAAAAGGTTAATACTATA
AAGAAACTGCATCAGTGTGAAGACTGTGAGAAGATATTTAGGTGGCGTTCACACCTAATTATACACCAGA
GAATTCACACCGGGGAGAAGCCTTATAAATGCAATGACTGTGGCAAAGCTTTTAATCGTAGCTCAAGGCT
TACCCAGCATCAAAAAATTCACATGGGATAG

Translation (686 aa):
MEVVTFGDVAVHFSREEWQCLDPGQRALYREVMLENHSSVAGLAGFLVFKPELISRLEQGEEPWVLDLQG
AEGTEAPRTSKTDSTIRTENEQACEDMDILKSESYGTVVRISPQDFPQNPGFGDVSDSEVWLDSHLGSPG
LKVTGFTFQNNCLNEETVVPKTFTKDAPQGCKELGSSGLDCQPLESQGESAEGMSQRCEECGKGIRATSD
IALHWEINTQKISRCQECQKKLSDCLQGKHTNNCHGEKPYECAECGKVFRLCSQLNQHQRIHTGEKPFKC
TECGKAFRLSSKLIQHQRIHTGEKPYRCEECGKAFGQSSSLIHHQRIHTGERPYGCRECGKAFSQQSQLV
RHQRTHTGERPYPCKECGKAFSQSSTLAQHQRMHTGEKAQILKASDSPSLVAHQRIHAVEKPFKCDECGK
AFRWISRLSQHQLIHTGEKPYKCNKCTKAFGCSSRLIRHQRTHTGEKPFKCDECGKGFVQGSHLIQHQRI
HTGEKPYVCNDCGKAFSQSSSLIYHQRIHKGEKPYECLQCGKAFSMSTQLTIHQRVHTGERPYKCNECGK
AFSQNSTLFQHQIIHAGVKPYECSECGKAFSRSSYLIEHQRIHTRAQWFYEYGNALEGSTFVSRKKVNTI
KKLHQCEDCEKIFRWRSHLIIHQRIHTGEKPYKCNDCGKAFNRSSRLTQHQKIHMG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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