NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS63684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63684.1 Public Homo sapiens 3 EOGT 24 110 108 CCDS HistoryNCBI Gene:285203Re-query CCDS DB by CCDS ID:63684.1Re-query CCDS DB by GeneID:285203See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63684.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383701.8 ENSP00000373206.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383701.8Link to Ensembl Protein Viewer:ENSP00000373206.3Re-query CCDS DB by Nucleotide ID:ENST00000383701Re-query CCDS DB by Protein ID:ENSP00000373206
Original member Current member EBI ENST00000540764.5 ENSP00000443780.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540764.5Link to Ensembl Protein Viewer:ENSP00000443780.2Re-query CCDS DB by Nucleotide ID:ENST00000540764Re-query CCDS DB by Protein ID:ENSP00000443780
Original member Current member NCBI NM_001278689.2 NP_001265618.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001278689.2Link to Protein Sequence:NP_001265618.1Re-query CCDS DB by Nucleotide ID:NM_001278689Re-query CCDS DB by Protein ID:NP_001265618Link to BLAST:NP_001265618.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265618.1 527 Q5NDL2-1 527 100% 0 0

Chromosomal Locations for CCDS 63684.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 68977618 68977764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68978333 68978435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68979668 68979787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68982811 68982872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68987445 68987513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68988295 68988381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68988506 68988577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68988925 68989017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 68998011 68998114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69001608 69001714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69004378 69004482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69005140 69005234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69007713 69007821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69008428 69008528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 69009637 69009846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1584 nt):
ATGTTAATGTTGTTTGTCTTTGGAGTCTTACTTCATGAAGTCTCACTGAGTGGTCAGAATGAAGCTCCTC
CTAATACTCACAGCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACAT
TCCCTTCTTTTTGCACAACAATAGGCATATTGCCACTGTCTGTAGGAAAGACTCTCTTTGTCCATATAAG
AAACACCTAGAGAAGCTAAAGTACTGCTGGGGTTATGAGAAATCCTGCAAACCAGAGTTCAGGTTTGGTT
ACCCAGTTTGCAGCTATGTCGACATGGGATGGACGGACACTCTTGAGTCAGCTGAGGACATATTTTGGAA
ACAAGCTGACTTTGGATATGCCAGAGAGAGGCTGGAGGAGATGCATGTGCTCTGTCAGCCTAAGGAAACG
AGTGACTCAAGTCTGGTGTGTTCCCGTTATCTTCAGTACTGCAGAGCAACCAATCTCTATCTTGATTTAA
GAAACATCAAGAGAAATCATGACAGATTTAAGGAGGACTTTTTCCAGAGTGGTGAAATTGGAGGGCACTG
TAAACTTGACATCCGTACATTGACGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCATGGTTTGCTGAG
CTACAAAGCTATACTCAGCTCAACTTCAGACCTATAGAAGATGCTAAATGTGACATTGTCATTGAAAAAC
CAACATATTTCATGAAATTAGATGCAGGTGTTAACATGTATCACCACTTCTGTGATTTCATCAATCTTTA
TATTACTCAGCACGTTAATAACTCATTCAGTACTGACGTGTACATCGTGATGTGGGACACCAGTTCTTAC
GGATATGGTGACCTATTCTCCGACACATGGAATGCATTTACTGATTATGACGTTATACATTTGAAAACTT
ATGATTCCAAAAGGGTATGTTTTAAAGAAGCTGTTTTTTCATTACTCCCCCGCATGAGGTATGGGCTGTT
CTATAATACTCCTCTGATATCTGGCTGTCAAAATACTGGACTATTCAGGGCATTTGCCCAGCATGTACTA
CACAGACTAAACATCACACAAGAAGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCA
CAGAATACCGGAAAATCCTTAACCAAAATGAGCTTGTAAATGCACTGAAAACAGTATCTACATTTGAAGT
CCAGATTGTTGATTACAAGTATAGAGAACTTGGGTTTTTAGATCAACTAAGGATCACACACAACACGGAC
ATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTTTTCCTTCCAGACTGGGCTGCTGTATTTG
AACTGTACAACTGTGAAGATGAACGCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACATCAC
TTGGCGACGGCAGAACAAAGTCTTTCCTCAGGATAAGGGCCACCATCCAACCCTGGGGGAGCACCCGAAG
TTCACCAACTACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGTATTGC
AACACCCAAAGTGGCCATTTAAGAAGAAACATGATGAGCTATAA

Translation (527 aa):
MLMLFVFGVLLHEVSLSGQNEAPPNTHSIPGEPLYNYASIRLPEEHIPFFLHNNRHIATVCRKDSLCPYK
KHLEKLKYCWGYEKSCKPEFRFGYPVCSYVDMGWTDTLESAEDIFWKQADFGYARERLEEMHVLCQPKET
SDSSLVCSRYLQYCRATNLYLDLRNIKRNHDRFKEDFFQSGEIGGHCKLDIRTLTSEGQRKSPLQSWFAE
LQSYTQLNFRPIEDAKCDIVIEKPTYFMKLDAGVNMYHHFCDFINLYITQHVNNSFSTDVYIVMWDTSSY
GYGDLFSDTWNAFTDYDVIHLKTYDSKRVCFKEAVFSLLPRMRYGLFYNTPLISGCQNTGLFRAFAQHVL
HRLNITQEGPKDGKIRVTILARSTEYRKILNQNELVNALKTVSTFEVQIVDYKYRELGFLDQLRITHNTD
IFIGMHGAGLTHLLFLPDWAAVFELYNCEDERCYLDLARLRGVHYITWRRQNKVFPQDKGHHPTLGEHPK
FTNYSFDVEEFMYLVLQAADHVLQHPKWPFKKKHDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH