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Report for CCDS63218.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63218.1 Public Homo sapiens 20 LZTS3 24 110 108 CCDS HistoryNCBI Gene:9762Re-query CCDS DB by CCDS ID:63218.1Re-query CCDS DB by GeneID:9762See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63218.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360342.7 ENSP00000353496.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360342.7Link to Ensembl Protein Viewer:ENSP00000353496.3Re-query CCDS DB by Nucleotide ID:ENST00000360342Re-query CCDS DB by Protein ID:ENSP00000353496
Original member Current member EBI ENST00000645462.1 ENSP00000495241.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645462.1Link to Ensembl Protein Viewer:ENSP00000495241.1Re-query CCDS DB by Nucleotide ID:ENST00000645462Re-query CCDS DB by Protein ID:ENSP00000495241
Original member Current member NCBI NM_001282533.2 NP_001269462.1 Accepted alive Link to Nucleotide Sequence:NM_001282533.2Link to Protein Sequence:NP_001269462.1Re-query CCDS DB by Nucleotide ID:NM_001282533Re-query CCDS DB by Protein ID:NP_001269462Link to BLAST:NP_001269462.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269462.1 627 O60299-2 627 100% 0 0

Chromosomal Locations for CCDS 63218.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 3164454 3165152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3165497 3165628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3165767 3166360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 3166705 3167163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1884 nt):
ATGGCGAAGCTGGAGACGCTGCCTGTGCGCGCTGACCCAGGGCGGGATCCTCTCCTGGCCTTTGCCCCAC
GGCCCTCCGAGCTTGGACCCCCGGACCCCCGCCTGGCCATGGGCAGCGTGGGCAGTGGGGTGGCCCATGC
CCAGGAGTTTGCCATGAAGAGCGTGGGTACCCGCACAGGGGGTGGGGGCAGCCAGGGCAGTTTCCCTGGC
CCCCGAGGCAGTGGCAGTGGGGCCAGCAGGGAGAGGCCGGGCCGCTACCCCTCAGAGGACAAGGGTCTCG
CCAACTCCCTCTACCTCAATGGTGAGCTGCGGGGCAGTGACCACACCGATGTCTGTGGCAACGTGGTTGG
CAGCAGCGGAGGCAGCAGCAGCAGTGGTGGCAGTGACAAAGCCCCACCGCAGTATCGTGAGCCCAGCCAC
CCACCCAAGCTCCTGGCCACCTCTGGCAAGCTAGACCAGTGCTCAGAACCACTAGTTCGGCCGTCGGCCT
TCAAGCCTGTCGTACCCAAGAATTTCCACTCCATGCAGAATTTGTGCCCCCCGCAGACCAATGGGACTCC
TGAGGGACGGCAGGGCCCTGGTGGCCTCAAAGGCGGACTGGACAAGTCTCGGACCATGACTCCAGCGGGT
GGGAGTGGGAGTGGCCTCTCAGACTCAGGCCGGAACTCCCTCACAAGCCTGCCCACCTACAGCTCCAGCT
ACAGCCAGCACCTGGCACCCCTCAGTGCCTCCACCAGCCACATTAACCGCATTGGCACTGCCAGCTATGG
TAGTGGTAGTGGCGGCAGCAGCGGTGGGGGGTCGGGCTACCAGGACCTGGGGACCTCCGATAGTGGACGG
GCCTCCAGCAAGAGTGGGTCGTCGTCATCTATGGGGCGGCCAGGCCACCTGGGCTCTGGGGAGGGCGGAG
GTGGAGGCCTGCCTTTCGCGGCCTGCTCACCGCCCTCCCCCAGTGCACTCATCCAGGAGCTGGAGGAGCG
GCTGTGGGAGAAGGAGCAGGAGGTGGCAGCTCTGCGGCGCAGCCTGGAGCAGAGCGAGGCGGCTGTGGCC
CAGCAGGACAAGAAGCAGCTGCAGGAGGAGGCGGCCCGGCTGATGCGGCAGCGGGAAGAGCTGGAGGACA
AGGTGGCCGCCTGCCAGAAGGAGCAGGCCGACTTCCTGCCCCGGATAGAGGAAACTAAGTGGGAGGTGTG
CCAGAAGGCTGGCGAGATCTCCCTCCTGAAGCAGCAGCTGAAGGACTCGCAGGCGGATGTGTCGCAGAAG
TTGAGTGAGATCGTGGGACTGCGCTCGCAGCTGCGGGAGGGCCGGGCTTCGCTGCGGGAGAAGGAGGAGC
AGCTGCTCAGCCTGCGGGACTCCTTCAGCAGCAAGCAGGCCAGCCTGGAGCTGGGCGAAGGCGAGCTGCC
TGCCGCCTGCCTCAAGCCGGCGCTGACCCCCGTGGACCCGGCCGAGCCACAGGATGCTCTGGCCACCTGC
GAGAGCGACGAGGCTAAGATGCGCCGTCAGGCCGGGGTGGCCGCTGCCGCCTCCTTGGTTTCCGTGGACG
GGGAGGCGGAGGCTGGCGGGGAGAGCGGGACGCGGGCCCTGCGGCGGGAGGTGGGGCGGCTGCAGGCCGA
GCTGGCGGCTGAGCGGCGGGCCCGGGAGCGCCAGGGTGCCAGCTTCGCCGAGGAGCGCCGCGTGTGGCTG
GAGGAGAAGGAGAAGGTGATCGAGTACCAGAAGCAGCTGCAGCTGAGCTACGTGGAGATGTACCAGCGCA
ACCAGCAGCTGGAGCGCAGGCTGCGGGAGCGCGGGGCCGCAGGGGGTGCAAGCACGCCCACTCCCCAGCA
TGGCGAGGAGAAGAAGGCCTGGACCCCCTCCCGCCTCGAGCGCATTGAGTCCACAGAAATCTGA

Translation (627 aa):
MAKLETLPVRADPGRDPLLAFAPRPSELGPPDPRLAMGSVGSGVAHAQEFAMKSVGTRTGGGGSQGSFPG
PRGSGSGASRERPGRYPSEDKGLANSLYLNGELRGSDHTDVCGNVVGSSGGSSSSGGSDKAPPQYREPSH
PPKLLATSGKLDQCSEPLVRPSAFKPVVPKNFHSMQNLCPPQTNGTPEGRQGPGGLKGGLDKSRTMTPAG
GSGSGLSDSGRNSLTSLPTYSSSYSQHLAPLSASTSHINRIGTASYGSGSGGSSGGGSGYQDLGTSDSGR
ASSKSGSSSSMGRPGHLGSGEGGGGGLPFAACSPPSPSALIQELEERLWEKEQEVAALRRSLEQSEAAVA
QQDKKQLQEEAARLMRQREELEDKVAACQKEQADFLPRIEETKWEVCQKAGEISLLKQQLKDSQADVSQK
LSEIVGLRSQLREGRASLREKEEQLLSLRDSFSSKQASLELGEGELPAACLKPALTPVDPAEPQDALATC
ESDEAKMRRQAGVAAAASLVSVDGEAEAGGESGTRALRREVGRLQAELAAERRARERQGASFAEERRVWL
EEKEKVIEYQKQLQLSYVEMYQRNQQLERRLRERGAAGGASTPTPQHGEEKKAWTPSRLERIESTEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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