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Report for CCDS6310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6310.1 Public Homo sapiens 8 TMEM74 24 110 108 CCDS HistoryNCBI Gene:157753Re-query CCDS DB by CCDS ID:6310.1Re-query CCDS DB by GeneID:157753See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6310.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297459.4 ENSP00000297459.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297459.4Link to Ensembl Protein Viewer:ENSP00000297459.3Re-query CCDS DB by Nucleotide ID:ENST00000297459Re-query CCDS DB by Protein ID:ENSP00000297459
Original member Current member NCBI NM_153015.3 NP_694560.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153015.3Link to Protein Sequence:NP_694560.1Re-query CCDS DB by Nucleotide ID:NM_153015Re-query CCDS DB by Protein ID:NP_694560Link to BLAST:NP_694560.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694560.1 305 Q96NL1 305 100% 0 0

Chromosomal Locations for CCDS 6310.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 108784181 108785098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGAGCTCCACTACCTTGCTAAGAAGAGCAACCAGGCAGACCTCTGTGATGCCAGGGACTGGAGTTCAA
GAGGGCTGCCTGGTGACCAGGCAGATACAGCAGCCACAAGAGCTGCTCTCTGCTGTCAGAAACAGTGTGC
ATCCACCCCAAGAGCAACCGAGATGGAAGGGTCTAAACTTAGTTCTTCTCCAGCATCCCCCTCCTCCTCT
CTGCAAAACAGTACTCTTCAGCCAGATGCCTTTCCACCAGGACTTCTCCACTCAGGGAACAACCAAATAA
CAGCGGAACGGAAAGTCTGTAACTGCTGCAGCCAGGAATTAGAAACTTCTTTTACCTATGTGGACAAAAA
CATCAACTTGGAGCAGCGGAACCGGAGCTCGCCATCAGCAAAAGGGCATAATCACCCTGGGGAGCTTGGC
TGGGAAAATCCAAATGAGTGGTCCCAAGAGGCTGCCATATCTTTGATATCTGAAGAGGAGGATGATACAA
GTTCAGAAGCCACGTCTTCAGGGAAGTCTATAGACTATGGTTTCATCAGCGCCATCTTGTTCTTGGTCAC
TGGGATCCTGCTCGTGATCATCTCTTACATCGTCCCACGGGAAGTGACTGTGGACCCCAACACTGTGGCA
GCCCGGGAGATGGAGCGCCTGGAGAAGGAGAGTGCGAGGCTGGGGGCTCACCTGGACCGCTGTGTGATTG
CGGGGCTCTGCCTCCTCACGCTGGGGGGCGTCATCCTGTCCTGCTTGTTAATGATGTCCATGTGGAAGGG
GGAGCTCTATCGTCGAAACAGATTTGCCTCTTCCAAAGAGTCTGCAAAACTCTATGGTTCTTTCAACTTC
AGGATGAAAACCAGCACGAATGAAAACACTCTGGAACTGTCCTTGGTAGAGGAAGATGCGCTTGCTGTAC
AGAGTTAA

Translation (305 aa):
MELHYLAKKSNQADLCDARDWSSRGLPGDQADTAATRAALCCQKQCASTPRATEMEGSKLSSSPASPSSS
LQNSTLQPDAFPPGLLHSGNNQITAERKVCNCCSQELETSFTYVDKNINLEQRNRSSPSAKGHNHPGELG
WENPNEWSQEAAISLISEEEDDTSSEATSSGKSIDYGFISAILFLVTGILLVIISYIVPREVTVDPNTVA
AREMERLEKESARLGAHLDRCVIAGLCLLTLGGVILSCLLMMSMWKGELYRRNRFASSKESAKLYGSFNF
RMKTSTNENTLELSLVEEDALAVQS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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