NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS63051.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63051.1 Public Homo sapiens 2 FASTKD1 24 110 108 CCDS HistoryNCBI Gene:79675Re-query CCDS DB by CCDS ID:63051.1Re-query CCDS DB by GeneID:79675See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63051.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453929.6 ENSP00000403229.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453929.6Link to Ensembl Protein Viewer:ENSP00000403229.2Re-query CCDS DB by Nucleotide ID:ENST00000453929Re-query CCDS DB by Protein ID:ENSP00000403229
Original member Current member NCBI NM_001281476.3 NP_001268405.1 Accepted alive Link to Nucleotide Sequence:NM_001281476.3Link to Protein Sequence:NP_001268405.1Re-query CCDS DB by Nucleotide ID:NM_001281476Re-query CCDS DB by Protein ID:NP_001268405Link to BLAST:NP_001268405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268405.1 804 Q53R41-2 804 100% 0 0

Chromosomal Locations for CCDS 63051.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 169529825 169529926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169530587 169530701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169531352 169531490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169537227 169537340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169540051 169540179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169544721 169544835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169546218 169546704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169555124 169555255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169557187 169557297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169560387 169560785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169563225 169563350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169569184 169569252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169571653 169572029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2415 nt):
ATGAAAAAAACACCTGTTTTCCTAGAGTCATTGGTTACAAATATGCTTCGTCTAAGAGCTATTTGTCCAT
TCTCCTGGAGAGTGTTTCAATTTCGACCCATCAGTTGTGAACCACTAATTATTCAGATGAATAAGTGTAC
AGATGAGGAGCAAATGTTTGGTTTTATTGAAAGAAACAAAGCCATACTTTCAGAAAAGCAAGTGGGATGT
GCATTTGATATGCTTTGGAAGCTTCAAAAGCAGAAGACCAGCCTGTTAAAAAATGCTGAGTATGTCAGAG
ACCATCCTCAATTTCTTACTCTTCATAATTTAGCTACAAATAAATTCAAATTAATGAATGACGATACCCT
GGTGAATGTGTTATACGTCACACAACAGTTTGCTGGTGAGGCCCATGACCCGCTAGTTGAAGCACTAGTT
ACAGAAGCATGGAGAAGGCTAGAAAGGTTTGATATTAAACTGCTCTCAGAATTTTCCTCTTGCCTAGCAG
ATCAGCATTTGTATTTTAGTCCATTAATGGGAAAAATAGCTGATATTGTTCATAGGAACTTGGAAACCAC
ACAGGACTTAAGTTCCTTGTCTGTCTTGATGGTCAACATATCTTCTTTAATATCACGACATTTTCAACAA
CAACTGGTGAACAAAACAGAACTTCTTTTTGACACCATAGATTCTTCTGAGGTCAACGTTGCAAAAAGCA
TAGCAAAGTTTCTTCGAAATGTTAGATATCGTTATCAACCACTATTAGAAAGATGTAATAACGTATTTTT
AAGTAATGTGGACCACCTTGATTTGGATTCCATCAGTAAAATACTTAGTGTATACAAATTTCTACAATTT
AATAGTTTTGAATTTATTATAATGGCTAAAAAGAAGCTAACTGAAATGATTCCTCTGTGTAATCATCCTG
CTAGCTTTGTAAAATTGTTTGTAGCATTGGGACCCATTGCAGGACCTGAAGAAAAGAAACAACTTAAATC
AACTATGTTATTGATGTCAGAGGACCTAACTGGCGAGCAAGCCCTGGCAGTGTTGGGAGCAATGGGAGAT
ATGGAAAGCAGAAACTCATGTCTGATTAAAAGAGTTACTTCAGTTCTGCATAAACATTTGGATGGCTATA
AACCATTAGAGTTGTTGAAGATAACTCAAGAATTAACTTTTCTGCATTTCCAAAGGAAGGAGTTTTTTGC
GAAACTTAGAGAATTACTGCTTAGTTATTTGAAAAATAGTTTCATACCAACTGAGGTGTCTGTTCTGGTC
CGTGCTATTTCCCTGCTCCCTTCTCCTCACTTGGACGAAGTGGGGATATCCCGAATTGAAGCCGTTTTAC
CACAGTGTGACCTAAATAACCTGAGTAGTTTTGCCACATCTGTTTTAAGATGGATTCAGCATGATCACAT
GTATTTGGATAATATGACTGCGAAACAACTGAAACTACTTCAAAAATTAGATCACTATGGTCGTCAGAGA
CTACAACACAGCAACAGTTTGGATCTGTTACGGAAGGAACTTAAATCTCTCAAAGGAAACACGTTTCCTG
AGTCACTTCTTGAAGAAATGATTGCTACTTTACAGCATTTCATGGATGATATTAATTACATAAATGTTGG
GGAGATTGCATCTTTTATTTCTAGTACTGATTACCTCAGTACTTTGCTACTAGATAGGATAGCCTCAGTG
GCTGTTCAGCAGATTGAAAAGATCCATCCTTTTACAATCCCTGCTATTATTCGTCCATTCAGCGTATTGA
ACTATGATCCACCTCAAAGGGATGAATTTTTGGGAACTTGCGTGCAACATCTTAATTCTTACTTAGGTAT
ATTGGATCCTTTTATATTAGTGTTTCTTGGTTTCTCTTTGGCCACACTTGAATATTTTCCAGAAGATCTG
CTAAAGGCAATTTTTAACATCAAATTCTTAGCTAGATTGGATTCTCAACTTGAAAGTATTGGTGGCATGG
ATGGAACACAACAGCAGATTTTTAAAATGTTAGCAGAGGTACTAGGAGGAATCAATTGTGTAAAAGCCTC
GGTTCTTACGCCTTATTACCACAAAGTAGATTTTGAGTGTATCTTGGATAAAAGAAAAAAACCTCTTCCG
TATGGAAGCCATAATATAGCATTGGGACAACTACCAGAAATGCCCTGGGAATCAAATATCGAAATAGTTG
GATCAAGGCTGCCACCAGGGGCTGAAAGGATTGCTTTGGAATTTTTGGATTCAAAAGCACTTTGTAGAAA
TATCCCTCACATGAAAGGAAAATCTGCTATGAAAAAACGACATTTGGAAATTCTGGGGTATCGTGTAATT
CAGATTTCCCAGTTTGAATGGAACTCTATGGCACTGTCAACAAAGGATGCTCGGATGGACTACCTGAGAG
AATGTATATTTGGAGAAGTCAAGTCATGTTTGTAG

Translation (804 aa):
MKKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNKAILSEKQVGC
AFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNVLYVTQQFAGEAHDPLVEALV
TEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIVHRNLETTQDLSSLSVLMVNISSLISRHFQQ
QLVNKTELLFDTIDSSEVNVAKSIAKFLRNVRYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQF
NSFEFIIMAKKKLTEMIPLCNHPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGEQALAVLGAMGD
MESRNSCLIKRVTSVLHKHLDGYKPLELLKITQELTFLHFQRKEFFAKLRELLLSYLKNSFIPTEVSVLV
RAISLLPSPHLDEVGISRIEAVLPQCDLNNLSSFATSVLRWIQHDHMYLDNMTAKQLKLLQKLDHYGRQR
LQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINYINVGEIASFISSTDYLSTLLLDRIASV
AVQQIEKIHPFTIPAIIRPFSVLNYDPPQRDEFLGTCVQHLNSYLGILDPFILVFLGFSLATLEYFPEDL
LKAIFNIKFLARLDSQLESIGGMDGTQQQIFKMLAEVLGGINCVKASVLTPYYHKVDFECILDKRKKPLP
YGSHNIALGQLPEMPWESNIEIVGSRLPPGAERIALEFLDSKALCRNIPHMKGKSAMKKRHLEILGYRVI
QISQFEWNSMALSTKDARMDYLRECIFGEVKSCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH