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Report for CCDS63046.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63046.1 Public Homo sapiens 2 COBLL1 24 110 108 CCDS HistoryNCBI Gene:22837Re-query CCDS DB by CCDS ID:63046.1Re-query CCDS DB by GeneID:22837See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63046.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000629362.2 ENSP00000487041.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000629362.2Link to Ensembl Protein Viewer:ENSP00000487041.2Re-query CCDS DB by Nucleotide ID:ENST00000629362Re-query CCDS DB by Protein ID:ENSP00000487041
Original member Current member NCBI NM_001278458.2 NP_001265387.1 Accepted alive Link to Nucleotide Sequence:NM_001278458.2Link to Protein Sequence:NP_001265387.1Re-query CCDS DB by Nucleotide ID:NM_001278458Re-query CCDS DB by Protein ID:NP_001265387Link to BLAST:NP_001265387.1

Chromosomal Locations for CCDS 63046.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164685946 164686032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164692221 164692397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164694269 164695836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164699405 164699499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164700522 164700756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164703104 164703220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164704444 164704518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164704952 164705105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164722075 164722311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164722425 164722522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164727106 164727144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164727969 164728197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164729914 164730115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164743687 164743875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164800534 164800554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164841156 164841246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164841957 164842044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3702 nt):
ATGCCGCCGAGCTGGTCCCCACTTATGTGCGGCCGTGCTGCAGAGGCGGCGGCGAGCTCCCGGACTCCGG
GCAGGGAAATGGGGCAGGCAGTGACGCGCCGCCTGGGAGCTGGAGCCCGCGCAGCGCCCCGCAGGGCGAT
GGACGGCCGAACCCCGCGCCCGCAGGACGCCCCAGCCAGGAGAGAGATTGCTGGGTCATGGAGAAAACCA
AAAGCCAAGGCACCACTTCCTCCAGCTGAGACCAAATATACTGATGTCTCTTCAGCTGCTGATTCTGTAG
AATCCACTGCTTTCATCATGGAACAGAAAGAAAACATGATAGATAAAGACGTTGAACTCTCAGTGGTCCT
ACCTGGGGATATTATCAAATCTACTACTGTTCATGGCAGTAAACCTATGATGGACTTGTTGATATTCCTT
TGTGCACAGTATCACTTAAATCCATCAAGTTACACAATCGATCTGTTGTCAGCTGAACAGAACCACATTA
AATTTAAGCCAAACACACCAATAGGAATGTTGGAGGTAGAGAAGGTAATTTTAAAGCCAAAAATGTTGGA
TAAGAAAAAACCTACACCTATAATACCAGAGAAAACTGTGAGAGTAGTGATTAATTTTAAGAAAACACAG
AAGACCATAGTGAGAGTGAGTCCACATGCATCGCTTCAAGAGCTTGCCCCTATTATATGTAGCAAATGTG
AGTTTGATCCGTTGCATACACTATTGTTGAAAGATTATCAATCGCAGGAGCCTCTTGACTTGACAAAATC
TCTTAATGACCTGGGACTAAGAGAATTATATGCGATGGATGTCAACAGAGCCACTTCTGTTACTGTCTTC
AGTAAGTCATCTTTACAAGAGTCCTGCCAAATATCACAAAACCTAGATATTATGAAGGAGAAAGAAAATA
AAGGGTTTTTCAGTTTTTTTCAACGCAGTAAGAAAAAGCGAGACCAAACTGCAAGTGCCCCTGCAACCCC
TCTAGTAAATAAGCACCGCCCAACTTTTACAAGGTCCAATACCATTTCCAAACCATATATTTCCAACACC
CTGCCGTCGGATGCACCCAAGAAGAGGCGGGCTCCACTGCCCCCGATGCCAGCATCTCAGAGTGTCCCCC
AAGACCTTGCACACATCCAGGAGAGGCCTGCTTCTTGTATAGTGAAATCCATGAGCGTGGATGAGACAGA
TAAGAGTCCCTGTGAAGCAGGAAGAGTGAGGGCAGGTTCACTGCAGCTCAGCAGCATGTCTGCAGGGAAT
TCATCTTTGAGAAGGACAAAGCGAAAAGCACCTTCCCCACCCTCCAAAATACCCCCGCATCAAAGTGATG
AAAATAGTCGTGTGACTGCCTTACAGCCAGTAGATGGAGTTCCTCCAGACAGTGCTTCAGAAGCAAACTC
TCCTGAGGAGCTATCCAGCCCAGAAACCTTTCACCCTGGGCTTTCCAGTCAGGAGCAGTGCACTGCGCCC
AAACTGATGGAGGAAACCTCTGTCTTTGAGTGCCCTGGGACACCTGAGGCAGCCATAACATCATTGACAT
CTGGAATAAGCTCTGATTATAGCCTTGAAGAGATAGATGAAAAGGAAGAACTGAGTGAAGTGCCTAAAGT
TGAAGCTGAAAATATTTCTCCGAAGTCACAAGATATTCCTTTTGTATCTACTGATATAATAAATACACTG
AAAAATGATCCTGACTCAGCCCTTGGCAATGGTAGTGGAGAGTTCTCACAAAACTCCATGGAAGAAAAAC
AAGAAACTAAAAGCACAGATGGACAAGAACCACACAGTGTAGTATATGATACAAGCAATGGAAAGAAGGT
AGTTGACAGTATAAGAAACTTGAAGTCGTTGGGCCCAAACCAAGAGAATGTAGTTCAAAATGAAATAATT
GTCTATCCAGAGAACACAGAAGACAATATGAAAAATGGAGTGAAGAAAACAGAAATCAATGTAGAAGGTG
TTGCCAAAAATAACAACATTGATATGGAAGTTGAGAGACCATCAAACTCTGAGGCACATGAAACTGATAC
TGCTATAAGTTACAAGGAAAACCATCTAGCAGCTTCATCAGTACCAGATCAAAAACTGAATCAACCCAGT
GCAGAAAAGACAAAAGATGCAGCAATTCAGACAACCCCTTCTTGTAACAGTTTTGATGGGAAACACCAAG
ATCATAATTTATCTGACTCCAAAGTTGAAGAATGTGTGCAAACTTCAAATAACAACATATCAACTCAACA
CTCATGCTTAAGTTCACAAGATTCTGTAAATACCTCAAGGGAATTCAGGAGTCAAGGCACCCTAATTATA
CATTCAGAAGATCCGCTTACCGTAAAAGATCCAATTTGTGCACATGGTAATGATGATCTTTTGCCTCCTG
TAGATAGGATTGACAAAAATTCCACTGCTTCTTACCTAAAGAATTACCCACTTTATAGACAGGACTACAA
TCCCAAGCCAAAACCTTCAAATGAAATTACACGAGAGTATATACCCAAAATTGGCATGACTACTTATAAA
ATAGTGCCTCCCAAATCCTTGGAAATATCGAAAGACTGGCAATCAGAAACCATAGAGTATAAAGATGATC
AGGACATGCATGCTTTAGGGAAAAAGCACACTCATGAGAATGTGAAAGAAACTGCCATCCAAACAGAAGA
TTCTGCTATTTCTGAAAGCCCAGAAGAGCCACTGCCAAACCTTAAACCGAAGCCTAACCTGAGAACAGAG
CATCAAGTGCCCAGTTCTGTGAGCTCACCTGATGATGCCATGGTTAGTCCTCTGAAACCTGCTCCCAAAA
TGACAAGAGACACTGGCACAGCTCCTTTTGCACCAAATTTGGAAGAAATAAACAATATTTTGGAATCAAA
ATTTAAATCTCGGGCTTCAAATGCCCAGGCCAAACCCAGCTCTTTTTTTTTGCAGATGCAGAAGAGAGTA
TCGGGTCACTATGTGACATCTGCAGCTGCCAAGAGTGTCCATGCTGCCCCTAATCCTGCTCCAAAAGAAC
TGACAAATAAAGAGGCAGAAAGGGATATGCTGCCTTCTCCGGAGCAGACTCTTTCTCCCTTAAGTAAAAT
GCCTCACTCTGTTCCACAACCCCTTGTTGAAAAAACTGATGATGATGTCATCGGTCAGGCTCCTGCTGAA
GCCTCCCCTCCTCCCATAGCTCCAAAACCTGTGACAATTCCTGCTAGTCAGGTATCCACACAAAATCTGA
AGACTTTGAAAACTTTTGGTGCCCCACGACCATACTCAAGTTCTGGTCCTTCACCGTTTGCTCTTGCTGT
AGTGAAAAGGTCACAGTCTTTCAGTAAAGAGCGCACCGAGTCACCTAGTGCCAGTGCATTGGTCCAACCT
CCAGCCAACACAGAGGAAGGGAAGACTCATTCTGTAAATAAATTTGTGGACATCCCACAGCTTGGTGTGT
CTGATAAGGAAAATAACTCTGCACATAATGAACAGAATTCCCAAATACCAACTCCAACTGATGGCCCATC
ATTCACTGTTATGAGACAAAGTTCTTTAACATTCCAAAGCTCTGACCCAGAACAGATGCGACAGAGTTTG
CTGACTGCAATCCGTTCGGGAGAGGCTGCTGCCAAATTGAAAAGGGTTACCATTCCATCAAATACAATAT
CTGTGAATGGAAGGTCAAGACTCAGCCATTCCATGTCCCCTGATGCCCAGGACGGCCATTAA

Translation (1233 aa):
MPPSWSPLMCGRAAEAAASSRTPGREMGQAVTRRLGAGARAAPRRAMDGRTPRPQDAPARREIAGSWRKP
KAKAPLPPAETKYTDVSSAADSVESTAFIMEQKENMIDKDVELSVVLPGDIIKSTTVHGSKPMMDLLIFL
CAQYHLNPSSYTIDLLSAEQNHIKFKPNTPIGMLEVEKVILKPKMLDKKKPTPIIPEKTVRVVINFKKTQ
KTIVRVSPHASLQELAPIICSKCEFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRATSVTVF
SKSSLQESCQISQNLDIMKEKENKGFFSFFQRSKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNT
LPSDAPKKRRAPLPPMPASQSVPQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGN
SSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAP
KLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTL
KNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVVQNEII
VYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPS
AEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREFRSQGTLII
HSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYK
IVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTE
HQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRV
SGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAE
ASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQP
PANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSL
LTAIRSGEAAAKLKRVTIPSNTISVNGRSRLSHSMSPDAQDGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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