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Report for CCDS63024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63024.1 Public Homo sapiens 2 R3HDM1 24 110 108 CCDS HistoryNCBI Gene:23518Re-query CCDS DB by CCDS ID:63024.1Re-query CCDS DB by GeneID:23518See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63024.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410054.5 ENSP00000386877.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000410054.5Link to Ensembl Protein Viewer:ENSP00000386877.1Re-query CCDS DB by Nucleotide ID:ENST00000410054Re-query CCDS DB by Protein ID:ENSP00000386877
Original member Current member NCBI NM_001282800.2 NP_001269729.1 Accepted alive Link to Nucleotide Sequence:NM_001282800.2Link to Protein Sequence:NP_001269729.1Re-query CCDS DB by Nucleotide ID:NM_001282800Re-query CCDS DB by Protein ID:NP_001269729Link to BLAST:NP_001269729.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269729.1 1044 Q15032-4 1044 100% 0 0

Chromosomal Locations for CCDS 63024.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 135602574 135602708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135621494 135621608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135622654 135622732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135631718 135631777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135631861 135632001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135635890 135635998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135636088 135636183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135638618 135638655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135638739 135638789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135638896 135639122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135641536 135641790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135645379 135645527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135651730 135652032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135661270 135661393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135675332 135675486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135680173 135680324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135709433 135709536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135710059 135710231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135715550 135715694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135721924 135722006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135722469 135722553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 135723937 135724292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3135 nt):
ATGGGACTCCTCCTGCCAGATTACAGATGGTTCACTACAGTTGACATCCTGGCTGACAACTGTGAAAAAG
AACCTTGGATTATTTTATTTTATTTTTGTGGGACACCACAATCCCAAATCCAAAGGACGCATCAGGAGAA
AATTCAGATCCAGTTAACACAATCATTTGAGAAAGAAGAGAAGCCCTCAAAAGATGAAGCAGAAAAAGAA
AAGGCCAGTGATAAGTTGCCCAGAAAAATGTTATCAAGAGATTCCAGTCAAGAATACACTGATTCAACTG
GCATAGATCTACATGAATTTTTAGTAAATACATTAAAAAACAATCCCAGGGACAGAATGATGCTGCTGAA
ATTGGAACAAGAAATTTTAGATTTCATTGGTAATAATGAGTCTCCACGTAAAAAATTCCCCCCAATGACA
TCTTACCATAGGATGCTATTACACAGAGTAGCCGCTTACTTTGGATTAGACCACAATGTTGATCAGAGTG
GGAAGTCTGTCATAGTAAACAAAACTAGCAATACAAGAATACCTGATCAGAAATTTAATGAACATATTAA
GGATGATAAAGGTGAAGACTTTCAGAAACGTTATATCCTCAAGAGAGATAACTCTAGCTTTGACAAAGAT
GATAACCAGATGAGAATACGTTTGAAAGATGACAGAAGAAGCAAATCTATAGAAGAAAGAGAAGAAGAGT
ACCAGAGAGCCAGAGACCGAATATTTTCCCAAGATTCCCTGTGTTCCCAAGAGAATTACATTATTGACAA
AAGACTCCAAGACGAGGATGCCAGTAGTACCCAGCAGAGGCGCCAGATATTTAGAGTTAATAAAGATGCT
TCAGGGAGATCTACAAATAGCCATCAAAGCAGCACTGAGAATGAGTTGAAGTACTCGGAACCACGACCCT
GGAGCAGCACAGATTCAGACAGCTCTCTTCGAAACCTGAAACCTGCTGTAACCAAAGCCAGCAGCTTCAG
TGGAATCTCAGTCCTGACAAGAGGTGATAGTTCTGGAAGCAGCAAAAGCATAGGCAGGCTTTCAAAAACA
GGTTCTGAGTCTTCTGGTAGTGTAGGGTCATCTACAGGCTCTCTTTCTCACATCCAGCAGCCTCTTCCAG
GTACAGCTCTCAGCCAGTCTTCTCATGGCGCACCTGTCGTCTATCCAACTGTCAGCACTCATAGTTCTCT
TTCCTTTGATGGTGGCCTAAATGGGCAAGTCGCATCTCCTAGCACTAGCTTCTTTTTGCTTCCCTTGGAA
GCGGCAGGCATACCACCTGGCAGTATTCTGATCAACCCACAAACAGGTCAGCCCTTCATAAACCCAGATG
GGAGTCCAGTTGTGTATAATCCTCCTATGACTCAACAACCAGTTAGATCCCAAGTGCCTGGACCTCCACA
GCCACCTCTGCCAGCCCCACCTCAACAACCAGCAGCTAATCACATTTTCTCACAGCAGGATAACCTAGGG
TCTCAGTTTAGCCACATGAGTCTTGCTCGCCAGCCATCTGCTGATGGTTCTGACCCTCATGCCGCCATGT
TCCAGTCCACTGTGGTTCTTCAGTCTCCACAGCAGTCTGGTTATATCATGACAGCAGCCCCTCCACCACA
TCCTCCTCCACCGCCACCACCACCACCTCCTCCTCCTCCCCTACCACCTGGGCAGCCAGTCCCTACTGCT
GGATATCCTGCCTCTGGTCATCCTGTCAGCCAGCCTGTGCTCCAGCAGCAGGGATATATTCAGCAGCCAT
CACCACAGATGCCAGCCTGTTATTGCGCTCCAGGCCACTATCACTCCAGCCAACCTCAGTATCGCCCAGT
CCCTTCTGTTCATTACAATTCACATCTAAACCAACCACTGCCACAACCTGCGCAGCAGACAGGTTATCAA
GTTATACCCAACCAGCAGCAAAACTACCAAGGAATAGTTGGAGTTCAGCAACCCCAGAGTCAGAGCCTAG
TCAGTGGCCAACCCAACAGCATTGGAAATCAGATTCAAGGAGTGGTCATCCCCTATACTTCAGTGCCAAC
ATATCAGGTTTCACTGCCTCAAGGTTCTCAAGGAATTCCCCATCAGACTTATCAACAGCCTGTTATGTTC
CCTAATCAGTCTAATCAAGGATCTATGCCCACAACAGGAATGCCTGTTTACTATAGTGTCATTCCACCTG
GTCAACAAAACAATTTAAGCTCTTCAGTAGGTTACCTGCAACATCCAGGATCAGAACAAGTACAATTTCC
TCGAACCACTTCACCATGCAGTTCCCAGCAGCTTCAAGGCCACCAATGTACAGCTGGACCACCACCGCCA
CCTGGTGGGGGGATGGTGATGATGCAGCTCAGTGTACCAAACAATCCACAATCTTGTGCCCACTCACCCC
CGCAGTGGAAACAAAACAAATATTACTGTGATCACCAGAGAGGACAGAAGTGTGTAGAATTTAGCAGTGT
AGACAATATTGTCCAGCACAGCCCTCAACTCAGTAGCCCCATTATTTCACCAGCTCAGTCGCCAGCACCA
GCTCAGCTGTCCACCCTGAAAACTGTACGTCCCTCTGGACCACCACTTTCCATCATGCCCCAATTTTCTA
GACCTTTTGTCCCCGGGCAAGGAGATTCCAGGTATCCATTACTTGGCCAGCCACTGCAGTACAATCCTCC
TGCTGTTCTGCACGGACACATTCCAAACCAACAGGGTCAGCCTGGCAGCAGGCATGGAAACCGAGGAAGG
AGACAAGCTAAAAAAGCTGCATCCACAGACCTTGGAGCAGGAGAAACAGTTGTTGGGAAGGTCTTGGAAA
TTACTGAACTACCAGATGGAATAACTCGCATGGAAGCTGAAAAGCTTTTTGGGGAACTCTTTAAAATTGG
CGCCAAGATCCGGTGGCTCCGGGACCCCCAGTCCCAACCACGTCGTCACCCCCTCTGCTGTGGCAGTGGG
GACAACACTGCCAACCCTGAACGCTCTAAACCCAGTGACTTGGCCTCCACCTACACCGTCTTAGCCACAT
TCCCCTCCATTTCAGCTGCACAGAATGCACTGAAGAAACAAATTAACTCAGTTAACAAGTTTAAGCTGAG
AACAAGCAAGAAGCACTATGACTTTCACATTTTGGAAAGGGCAAGTTCTCAGTAA

Translation (1044 aa):
MGLLLPDYRWFTTVDILADNCEKEPWIILFYFCGTPQSQIQRTHQEKIQIQLTQSFEKEEKPSKDEAEKE
KASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPMT
SYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSFDKD
DNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNKDA
SGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKT
GSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLE
AAGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQQDNLG
SQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTA
GYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQ
VIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMF
PNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPP
PGGGMVMMQLSVPNNPQSCAHSPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAP
AQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRHGNRGR
RQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPRRHPLCCGSG
DNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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