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Report for CCDS6302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6302.1 Public Homo sapiens 8 DPYS 24 110 108 CCDS HistoryNCBI Gene:1807Re-query CCDS DB by CCDS ID:6302.1Re-query CCDS DB by GeneID:1807See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6302.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000351513.7 ENSP00000276651.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000351513.7Link to Ensembl Protein Viewer:ENSP00000276651.2Re-query CCDS DB by Nucleotide ID:ENST00000351513Re-query CCDS DB by Protein ID:ENSP00000276651
Original member Current member NCBI NM_001385.3 NP_001376.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001385.3Link to Protein Sequence:NP_001376.1Re-query CCDS DB by Nucleotide ID:NM_001385Re-query CCDS DB by Protein ID:NP_001376Link to BLAST:NP_001376.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001376.1 519 Q14117 519 100% 0 0

Chromosomal Locations for CCDS 6302.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 104381198 104381314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104392784 104392991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104424247 104424389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104427980 104428121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104429545 104429701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104444248 104444437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104447324 104447503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104451246 104451404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104466657 104466920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1560 nt):
ATGGCGGCGCCCTCGCGGCTCCTGATCCGCGGGGGTCGCGTGGTCAACGATGACTTCTCGGAGGTGGCCG
ACGTGCTGGTGGAGGACGGCGTGGTGCGGGCACTCGGGCACGACCTGCTGCCTCCCGGGGGCGCTCCTGC
GGGGCTGCGGGTCCTCGACGCCGCCGGCAAGCTCGTCCTGCCCGGAGGCATCGACACACACACGCACATG
CAGTTCCCCTTCATGGGCTCGCGGTCCATCGACGACTTCCACCAGGGCACCAAGGCTGCTCTCTCAGGAG
GCACCACCATGATTATTGATTTCGCCATTCCTCAGAAAGGTGGCTCCCTCATTGAGGCCTTCGAGACCTG
GCGAAGCTGGGCTGATCCCAAAGTTTGCTGCGACTACAGCCTTCATGTGGCAGTGACGTGGTGGAGTGAC
CAGGTTAAAGAAGAAATGAAAATCCTTGTGCAAGATAAAGGTGTTAACTCTTTCAAGATGTTTATGGCCT
ATAAAGATCTGTACATGGTGACAGACCTGGAGCTGTACGAAGCCTTCTCTCGGTGCAAGGAAATTGGAGC
AATTGCCCAGGTCCATGCGGAAAATGGAGACTTAATTGCAGAGGGAGCAAAGAAGATGTTGGCTCTGGGG
ATAACAGGCCCTGAGGGCCACGAGCTGTGCCGCCCAGAGGCAGTGGAGGCAGAGGCCACGCTGAGAGCCA
TCACCATAGCCAGCGCTGTGAACTGTCCTCTCTACATTGTGCATGTGATGAGCAAGTCTGCAGCTAAGGT
GATAGCGGATGCAAGGAGAGATGGGAAGGTGGTCTATGGTGAACCCATAGCAGCCAGTCTTGGCACAGAT
GGCACTCACTACTGGAATAAAGAATGGCACCATGCAGCCCACCATGTCATGGGTCCACCTTTGCGACCAG
ACCCCTCAACACCCGACTTCCTCATGAATCTGTTGGCTAATGATGATCTAACCACAACAGGGACTGATAA
CTGCACTTTCAACACCTGCCAGAAAGCTCTTGGGAAGGATGATTTTACCAAGATCCCCAATGGGGTGAAT
GGTGTTGAAGATCGGATGTCCGTAATATGGGAAAAAGGCGTGCATAGTGGTAAAATGGATGAAAACAGAT
TTGTGGCAGTTACCAGCACAAATGCAGCCAAAATTTTTAATCTCTATCCAAGAAAAGGAAGAATAGCTGT
AGGATCAGATGCTGACATTGTTATTTGGGACCCAAAAGGCACAAGGACTATCTCAGCAAAAACTCATCAT
CAGGCTGTTAACTTCAACATTTTCGAGGGCATGGTTTGCCACGGGGTGCCCCTTGTGACTATTTCAAGAG
GCAAAGTGGTATATGAAGCCGGAGTGTTCAGTGTCACGGCAGGAGATGGGAAGTTTATTCCTCGAAAACC
ATTTGCTGAATATATTTACAAACGAATAAAGCAGCGAGACCGGACTTGCACACCTACCCCTGTGGAGCGT
GCACCCTATAAGGGAGAAGTCGCCACACTGAAATCCAGAGTGACAAAAGAAGATGCCACAGCAGGGACCA
GGAAACAGGCCCACCCCTGA

Translation (519 aa):
MAAPSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHM
QFPFMGSRSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSD
QVKEEMKILVQDKGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALG
ITGPEGHELCRPEAVEAEATLRAITIASAVNCPLYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTD
GTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVN
GVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHH
QAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRDRTCTPTPVER
APYKGEVATLKSRVTKEDATAGTRKQAHP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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