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Report for CCDS62710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62710.1 Public Homo sapiens 19 CLASRP 24 110 108 CCDS HistoryNCBI Gene:11129Re-query CCDS DB by CCDS ID:62710.1Re-query CCDS DB by GeneID:11129See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62710.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391953.8 ENSP00000375815.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391953.8Link to Ensembl Protein Viewer:ENSP00000375815.3Re-query CCDS DB by Nucleotide ID:ENST00000391953Re-query CCDS DB by Protein ID:ENSP00000375815
Original member Current member NCBI NM_001278439.2 NP_001265368.1 Accepted alive Link to Nucleotide Sequence:NM_001278439.2Link to Protein Sequence:NP_001265368.1Re-query CCDS DB by Nucleotide ID:NM_001278439Re-query CCDS DB by Protein ID:NP_001265368Link to BLAST:NP_001265368.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265368.1 612 Q8N2M8-4 612 100% 0 0

Chromosomal Locations for CCDS 62710.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45040213 45040311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45052071 45052097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45053111 45053177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45056450 45056534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45057750 45057898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45059268 45059364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45060389 45060467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45060554 45060627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45062154 45062195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45064012 45064227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45064343 45064630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45067337 45067594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45068015 45068054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45068420 45068480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45069066 45069124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45069202 45069248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45070022 45070104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45070537 45070561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45070803 45070845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1839 nt):
ATGTGGCACGAGGCTCGGAAGCATGAGCGGAAGCTTCGAGGCATGATGGTCGACTACAAGAAGAGGGCGG
AGCGGAGACGGGAGTATTATGAAAAGATCAAGAAGGACCCAGCCCAGTTCCTGCAGGAGTCGGACGAACG
GAAGTGTAACTACGAGCGCTACAGAGGCCTGGTGCAGAACGACTTTGCCGGCATCTCAGAGGAGCAGTGC
CTGTACCAGATCTACATTGATGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGAAGAAGC
TGGCAGAGAAGAAGGCTTCCATCGGTTATACCTACGAGGACAGCACGGTGGCCGAGGTAGAGAAGGCGGC
AGAAAAGCCAGAGGAGGAGGAGTCAGCGGCCGAGGAGGAGAGCAACTCGGACGAAGATGAGGTCATCCCC
GACATCGACGTGGAGGTGGACGTGGATGAATTGAACCAGGAGCAGGTGGCAGATCTCAACAAACAGGCCA
CGACTTATGGCATGGCCGACGGTGACTTCGTCAGGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCCAT
CAAGCATGCCAAGGCTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGA
GAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGCCGAGACAGCCCCA
CCTATGACCCCTATAAGCGGTCACCCTCGGAGTCCAGCTCAGAGTCCCGCTCCCGCTCCCGCTCCCCGAC
CCCGGGCCGCGAGGAGAAGATCACGTTCATCACCAGTTTTGGGGGCAGCGATGAGGAGGCAGCCGCAGCC
GCTGCTGCCGCAGCAGCATCAGGAGTCACCACAGGGAAGCCCCCCGCACCTCCCCAGCCTGGCGGCCCCG
CCCCGGGACGTAATGCCAGCGCCCGCCGCCGCTCCTCCTCCTCCTCCTCCTCCTCTTCTGCCTCGAGGAC
CTCCAGCTCCCGCTCCAGCTCTCGCTCCAGCTCCCGCTCTCGCCGTGGTGGGGGCTACTACCGTTCCGGC
CGCCACGCCCGCTCCCGGTCCCGCTCCTGGTCCCGCTCCCGCTCCCGCTCCCGGCGCTATTCCCGGTCCC
GTAGCCGTGGCCGGCGGCACTCAGGTGGGGGCTCCCGAGACGGACACCGGTACTCCCGCTCGCCCGCCCG
GCGTGGTGGTTACGGGCCCCGGCGCAGAAGCAGGAGCCGCTCCCACTCAGGGGACCGCTACAGGCGGGGC
GGCCGGGGCCTCAGGCACCACAGCAGTAGCCGCAGCCGCAGCAGCTGGTCCCTCAGCCCGTCCCGCAGTC
GCAGCCTGACTCGCAGCCGCAGCCATAGCCCCAGCCCCAGCCAGAGCCGCAGCCGCAGCCGCAGCCGCAG
CCAGAGCCCCTCGCCATCACCCGCAAGAGAGAAGCTGACCAGGCCGGCCGCGTCCCCTGCTGTGGGCGAG
AAGCTGAAAAAGACCGAACCTGCCGCTGGTAAAGAGACAGGAGCTGCCAAACCCAAGCTGACGCCTCAGG
AGAAGCTGAAACTGAGGATGCAGAAGGCGCTGAACAGGCAGTTCAAGGCGGATAAGAAGGCGGCACAAGA
AAAGATGATCCAGCAGGAGCATGAGCGGCAGGAGCGGGAAGACGAGCTTCGAGCCATGGCCCGCAAGATC
CGCATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGAGTGGGAACGCCAGTACAGCCGGCAGAGCC
GCTCACCCTCCCCCCGATACAGTCGAGAATACAGCTCTTCTCGAAGGCGCTCAAGGTCCCGATCCCGAAG
CCCCCATTACCGACATTAG

Translation (612 aa):
MWHEARKHERKLRGMMVDYKKRAERRREYYEKIKKDPAQFLQESDERKCNYERYRGLVQNDFAGISEEQC
LYQIYIDELYGGLQRPSEDEKKKLAEKKASIGYTYEDSTVAEVEKAAEKPEEEESAAEEESNSDEDEVIP
DIDVEVDVDELNQEQVADLNKQATTYGMADGDFVRMLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRR
EFREKRLRGRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGREEKITFITSFGGSDEEAAAA
AAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSG
RHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRG
GRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSPSPAREKLTRPAASPAVGE
KLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQFKADKKAAQEKMIQQEHERQEREDELRAMARKI
RMKERERREKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSRSRSPHYRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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