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Report for CCDS6209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6209.1 Public Homo sapiens 8 KCNB2 24 110 108 CCDS HistoryNCBI Gene:9312Re-query CCDS DB by CCDS ID:6209.1Re-query CCDS DB by GeneID:9312See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523207.2 ENSP00000430846.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000523207.2Link to Ensembl Protein Viewer:ENSP00000430846.1Re-query CCDS DB by Nucleotide ID:ENST00000523207Re-query CCDS DB by Protein ID:ENSP00000430846
Original member Current member NCBI NM_004770.3 NP_004761.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004770.3Link to Protein Sequence:NP_004761.2Re-query CCDS DB by Nucleotide ID:NM_004770Re-query CCDS DB by Protein ID:NP_004761Link to BLAST:NP_004761.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004761.2 911 Q92953 911 100% 0 0

Chromosomal Locations for CCDS 6209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 72567735 72568313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 72935935 72938091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2736 nt):
ATGGCAGAAAAGGCTCCCCCGGGCTTAAACAGGAAGACTTCAAGGTCGACACTTTCCCTTCCTCCAGAGC
CTGTGGACATTATCCGGAGCAAAACATGCTCCAGGAGAGTTAAGATCAATGTGGGGGGCCTCAACCACGA
AGTCCTGTGGAGAACGCTGGACAGGCTGCCCAGGACGCGCCTGGGGAAGCTTCGAGACTGCAACACACAC
GAGAGCCTCCTGGAAGTGTGCGACGACTATAATCTGAACGAGAACGAGTATTTCTTTGATCGGCATCCAG
GAGCCTTCACTTCCATTTTAAATTTCTACCGGACCGGGAAACTCCATATGATGGAAGAAATGTGTGCACT
TTCGTTTGGCCAAGAACTTGATTACTGGGGGATTGATGAGATCTACTTGGAGTCCTGCTGCCAGGCCAGA
TATCATCAAAAAAAAGAACAAATGAACGAAGAACTGAGGCGAGAGGCAGAGACTATGCGAGAGCGAGAAG
GAGAAGAGTTTGATAATACCTGCTGCCCTGATAAAAGGAAGAAACTGTGGGACTTGCTGGAGAAACCTAA
CTCATCAGTGGCTGCAAAGATCCTGGCCATCGTGTCTATCCTGTTCATTGTGCTTTCCACCATTGCTTTG
TCTCTCAATACGCTGCCGGAGCTGCAGGAAACGGACGAATTTGGACAACTCAATGACAACCGCCAATTAG
CACACGTGGAGGCTGTGTGTATTGCATGGTTTACCATGGAGTACCTTTTGCGATTCTTATCCTCACCAAA
TAAATGGAAGTTCTTCAAAGGCCCACTGAATGTCATTGATTTGCTGGCCATCTTGCCGTACTATGTCACC
ATTTTTCTGACGGAGTCCAACAAGAGCGTGCTGCAGTTCCAAAACGTGAGGCGCGTGGTCCAGATCTTCC
GAATCATGCGCATCCTCAGGATCCTGAAACTCGCCAGGCATTCGACAGGCCTGCAGTCTCTGGGTTTCAC
CCTTAGGCGGAGTTACAATGAATTGGGCTTGTTGATATTGTTTCTGGCCATGGGGATAATGATATTTTCC
AGCCTGGTATTTTTTGCTGAGAAGGATGAAGATGCTACCAAGTTCACCAGTATCCCTGCATCATTTTGGT
GGGCCACCATCACCATGACCACTGTTGGCTATGGTGACATTTACCCTAAAACATTACTAGGGAAAATTGT
GGGAGGTCTGTGCTGTATTGCTGGGGTTCTGGTTATTGCCCTTCCTATCCCAATTATTGTGAACAATTTT
TCTGAGTTTTACAAGGAGCAGAAACGCCAAGAGAAAGCAATTAAAAGGAGGGAGGCTCTTGAGCGGGCCA
AAAGGAACGGAAGCATCGTTTCTATGAACTTAAAAGATGCCTTCGCTCGAAGTATGGAACTGATAGATGT
GGCTGTTGAGAAGGCCGGAGAGTCCGCCAACACAAAGGACTCCGCCGACGATAATCACCTGTCGCCAAGC
CGGTGGAAGTGGGCCAGGAAGGCTCTGTCGGAAACAAGCTCCAACAAGTCTTTCGAGAATAAGTACCAGG
AGGTTAGCCAAAAAGACTCCCACGAGCAGCTGAACAACACGTCTTCCTCCAGCCCACAGCATCTGAGTGC
CCAGAAACTGGAGATGCTATACAATGAAATCACCAAGACACAGCCTCATTCTCACCCAAACCCAGACTGC
CAAGAAAAGCCTGAGAGGCCATCTGCATATGAAGAAGAGATTGAAATGGAAGAAGTGGTGTGTCCACAGG
AGCAGCTGGCCGTGGCACAGACCGAGGTCATTGTGGACATGAAGAGCACCTCCAGCATCGACAGCTTCAC
CAGCTGTGCCACCGACTTCACAGAGACAGAGAGATCGCCGCTGCCGCCGCCCTCCGCCTCTCACTTGCAG
ATGAAGTTCCCAACCGACCTCCCAGGGACAGAAGAGCACCAAAGAGCTAGGGGCCCCCCGTTTCTAACTC
TATCCAGAGAGAAAGGACCTGCTGCCAGGGATGGCACGCTGGAGTATGCCCCAGTTGACATAACTGTGAA
CCTCGATGCCAGTGGCTCCCAGTGTGGGCTACATAGTCCTTTGCAGTCTGACAATGCCACCGACAGTCCT
AAGAGCTCTCTAAAAGGCAGCAACCCACTAAAGTCCAGATCCCTCAAAGTGAACTTTAAGGAAAATAGAG
GCAGTGCACCACAGACCCCGCCCAGCACAGCCAGGCCACTGCCAGTCACCACAGCTGACTTTTCGCTCAC
TACCCCGCAGCACATCAGTACCATCCTCTTAGAAGAAACCCCCTCCCAGGGAGACAGACCCTTGCTGGGC
ACTGAGGTTTCAGCGCCTTGTCAGGGACCTTCCAAAGGGCTGTCCCCCAGGTTTCCCAAGCAGAAACTGT
TCCCTTTCTCTTCAAGAGAGAGGAGGAGCTTCACTGAAATAGATACTGGTGACGACGAAGACTTCTTAGA
GCTCCCAGGGGCAAGGGAGGAGAAGCAGGTGGACTCCAGCCCAAATTGCTTTGCAGATAAGCCTAGTGAT
GGGAGAGACCCTTTAAGAGAAGAGGGCAGTGTGGGCTCTTCCTCCCCGCAGGACACAGGTCACAACTGTA
GGCAAGACATTTACCATGCTGTGAGTGAAGTCAAAAAGGACAGTAGTCAAGAAGGGTGCAAGATGGAAAA
TCACTTGTTTGCCCCAGAAATTCATTCCAACCCAGGAGACACAGGTTATTGTCCCACACGTGAAACCAGC
ATGTGA

Translation (911 aa):
MAEKAPPGLNRKTSRSTLSLPPEPVDIIRSKTCSRRVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTH
ESLLEVCDDYNLNENEYFFDRHPGAFTSILNFYRTGKLHMMEEMCALSFGQELDYWGIDEIYLESCCQAR
YHQKKEQMNEELRREAETMREREGEEFDNTCCPDKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIAL
SLNTLPELQETDEFGQLNDNRQLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVT
IFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFS
SLVFFAEKDEDATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNF
SEFYKEQKRQEKAIKRREALERAKRNGSIVSMNLKDAFARSMELIDVAVEKAGESANTKDSADDNHLSPS
RWKWARKALSETSSNKSFENKYQEVSQKDSHEQLNNTSSSSPQHLSAQKLEMLYNEITKTQPHSHPNPDC
QEKPERPSAYEEEIEMEEVVCPQEQLAVAQTEVIVDMKSTSSIDSFTSCATDFTETERSPLPPPSASHLQ
MKFPTDLPGTEEHQRARGPPFLTLSREKGPAARDGTLEYAPVDITVNLDASGSQCGLHSPLQSDNATDSP
KSSLKGSNPLKSRSLKVNFKENRGSAPQTPPSTARPLPVTTADFSLTTPQHISTILLEETPSQGDRPLLG
TEVSAPCQGPSKGLSPRFPKQKLFPFSSRERRSFTEIDTGDDEDFLELPGAREEKQVDSSPNCFADKPSD
GRDPLREEGSVGSSSPQDTGHNCRQDIYHAVSEVKKDSSQEGCKMENHLFAPEIHSNPGDTGYCPTRETS
M


Links Key
 Links to:   History report
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  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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