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Report for CCDS61787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61787.1 Public Homo sapiens 16 UNKL 24 110 108 CCDS HistoryNCBI Gene:64718Re-query CCDS DB by CCDS ID:61787.1Re-query CCDS DB by GeneID:64718See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 61787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248104.11 ENSP00000248104.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000248104.11Link to Ensembl Protein Viewer:ENSP00000248104.7Re-query CCDS DB by Nucleotide ID:ENST00000248104Re-query CCDS DB by Protein ID:ENSP00000248104
Original member Current member NCBI NM_001276414.2 NP_001263343.1 Accepted alive Link to Nucleotide Sequence:NM_001276414.2Link to Protein Sequence:NP_001263343.1Re-query CCDS DB by Nucleotide ID:NM_001276414Re-query CCDS DB by Protein ID:NP_001263343Link to BLAST:NP_001263343.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263343.1 229 Q9H9P5-3 229 100% 0 0

Chromosomal Locations for CCDS 61787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1366240 1366395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1367092 1367349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1367656 1367858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1369934 1370006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGACCTGCTGCTCACAGGTTCCCCCACGCCGCAGACCGAGTCTCGCTCTGTCGCCCAGGTTGGACTGCA
ATGGTTTGAACGGTGTCCCCGGGAGCATCTGGGACTTTGTTTCCGGCAGCTTCTCCCCCAGCCCCTCCCC
CATCCTGAGTGCCGGCCCCCCATCCTCTTCGAGTGCAAGTCCAAACGGAGCTGAGCTGGCCCGGGTCAGG
CGGCAGCTGGACGAGGCCAAGAGGAAGATCCGGCAGTGGGAGGAGTCCTGGCAGCAGGTGAAGCAGGTCT
GCGATGCCTGGCAGCGAGAGGCGCAGGAGGCCAAGGAGCGTGCCCGTGTGGCCGATAGCGACCGGCAGCT
GGCGCTGCAGAAGAAGGAGGAGGTGGAGGCACAGGTGAAGCAGCTGCAGGAGGAGCTGGAGGGCCTGGGC
GTAGCCTCCACACTGCCGGGGCTGCGGGGCTGTGGGGACATCGGCACCATTCCCCTGCCGAAGCTGCACT
CGCTGCAGAGTCAGCTGCGCCTGGACCTGGAGGCGGTGGACGGCGTGATCTTCCAGCTCCGCGCCAAGCA
GTGTGTGGCCTGCCGGGAGCGGGCCCACGGTGCTGTCCTGCGGCCCTGTCAGCACCACATCCTCTGTGAG
CCGTGTGCGGCCACCGCACCTGAGTGCCCCTACTGCAAGGGCCAGCCCCTGCAGTGGTGA

Translation (229 aa):
MTCCSQVPPRRRPSLALSPRLDCNGLNGVPGSIWDFVSGSFSPSPSPILSAGPPSSSSASPNGAELARVR
RQLDEAKRKIRQWEESWQQVKQVCDAWQREAQEAKERARVADSDRQLALQKKEEVEAQVKQLQEELEGLG
VASTLPGLRGCGDIGTIPLPKLHSLQSQLRLDLEAVDGVIFQLRAKQCVACRERAHGAVLRPCQHHILCE
PCAATAPECPYCKGQPLQW


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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