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Report for CCDS61751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61751.1 Public Homo sapiens 15 PEX11A 24 110 108 CCDS HistoryNCBI Gene:8800Re-query CCDS DB by CCDS ID:61751.1Re-query CCDS DB by GeneID:8800See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561257.1 ENSP00000453492.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561257.1Link to Ensembl Protein Viewer:ENSP00000453492.1Re-query CCDS DB by Nucleotide ID:ENST00000561257Re-query CCDS DB by Protein ID:ENSP00000453492
Original member Current member NCBI NM_001271572.2 NP_001258501.1 Accepted alive Link to Nucleotide Sequence:NM_001271572.2Link to Protein Sequence:NP_001258501.1Re-query CCDS DB by Nucleotide ID:NM_001271572Re-query CCDS DB by Protein ID:NP_001258501Link to BLAST:NP_001258501.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258501.1 216 O75192-2 216 100% 0 0

Chromosomal Locations for CCDS 61751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89683377 89683855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89686431 89686546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89690577 89690632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (651 nt):
ATGGACGCCTTCACCCGCTTCACCAACCAGACCCAGGGCCGGGACCGACTCTTCAGAGCCACTCAGTACA
CATGCATGTTGCTTAGATATTTGTTAGAGCCCAAAGCTGGCAAAGAGAAGGTGGTAATGAAGCTCAAGAA
ACTGGAGTCCAGTGTGAGCACTGGTCGTAAATCCAACCTGAACCGTGTGATTTATTTCATCTGTGACACC
ATCCTCTGGGTGAGGAGCGTAGGTCTCACCTCTGGCATCAACAAAGAGAAATGGCGAACGAGGGCTGCTC
ACCACTACTACTATTCTCTTCTGCTGAGCCTGGTCAGGGATCTGTATGAAATCTCCCTGCAGATGAAACG
AGTTACATGTGACAGGGCAAAGAAAGAGAAATCAGCATCCCAGGATCCTCTTTGGTTCAGCGTGGCTGAG
GAGGAAACAGAATGGCTCCAATCCTTTCTACTTCTTTTATTCCGATCTCTGAAGCAGCATCCTCCCTTGC
TCCTGGACACAGTGAAGAACCTTTGTGATATCCTGAACCCTTTGGACCAGCTGGGGATCTATAAATCCAA
TCCTGGCATCATTGGACTTGGAGGTCTTGTGTCCTCTATAGCAGGCATGATCACTGTGGCATATCCTCAG
ATGAAGCTGAAGACCCGTTAG

Translation (216 aa):
MDAFTRFTNQTQGRDRLFRATQYTCMLLRYLLEPKAGKEKVVMKLKKLESSVSTGRKSNLNRVIYFICDT
ILWVRSVGLTSGINKEKWRTRAAHHYYYSLLLSLVRDLYEISLQMKRVTCDRAKKEKSASQDPLWFSVAE
EETEWLQSFLLLLFRSLKQHPPLLLDTVKNLCDILNPLDQLGIYKSNPGIIGLGGLVSSIAGMITVAYPQ
MKLKTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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