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Report for CCDS6161.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6161.1 Public Homo sapiens 8 TMEM68 24 110 108 CCDS HistoryNCBI Gene:137695Re-query CCDS DB by CCDS ID:6161.1Re-query CCDS DB by GeneID:137695See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6161.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334667.6 ENSP00000335416.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000334667.6Link to Ensembl Protein Viewer:ENSP00000335416.2Re-query CCDS DB by Nucleotide ID:ENST00000334667Re-query CCDS DB by Protein ID:ENSP00000335416
Original member Current member NCBI NM_152417.3 NP_689630.1 Accepted alive Link to Nucleotide Sequence:NM_152417.3Link to Protein Sequence:NP_689630.1Re-query CCDS DB by Nucleotide ID:NM_152417Re-query CCDS DB by Protein ID:NP_689630Link to BLAST:NP_689630.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689630.1 257 Q96MH6-2 257 100% 0 0

Chromosomal Locations for CCDS 6161.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 55740132 55740218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55750964 55751157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55756244 55756411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55762635 55762959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGATAGACAAAAATCAAACCTGTGGTGTAGGACAGGATTCTGTGCCCTATATGATTTGTCTGATTCACA
TACTCGAAGAATGGTTTGGTGTGGAGCAGTTGGAGGACTATTTGAATTTTGCAAACTATCTCTTGTGGGT
TTTTACACCACTAATACTTTTAATACTTCCTTACTTTACTATCTTTCTTCTCTACCTTACTATTATTTTC
TTACACATTTATAAGAGAAAGAATGTATTGAAAGAAGCCTACTCTCATAATTTATGGGATGGTGCAAGGA
AAACAGTGGCAACTCTGTGGGATGGACATGCAGCCGTTTGGCATGGTTATGAAGTTCATGGAATGGAAAA
AATACCAGAAGATGGACCAGCACTTATAATTTTTTATCATGGAGCTATTCCTATAGATTTTTACTATTTC
ATGGCTAAAATATTTATACACAAAGGCAGAACTTGCCGAGTAGTAGCTGATCACTTTGTCTTTAAAATTC
CAGGGTTTAGTTTATTACTGGATGTGTTTTGTGCTCTACATGGACCAAGAGAAAAATGTGTTGAAATTCT
GAGGAGTGGCCACTTGTTAGCTATCTCACCAGGTGGAGTTCGAGAAGCCCTAATTAGTGATGAAACTTAT
AACATCGTATGGGGTCATCGCAGAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTGACGAAGAATGCTG
TTCAAGCTTTGATTGATAAGCACCAAAGAATACCAGGAAACATTATGAGTGCTTTGTTAGAACGTTTTCA
TTGA

Translation (257 aa):
MIDKNQTCGVGQDSVPYMICLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIF
LHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEDGPALIIFYHGAIPIDFYYF
MAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETY
NIVWGHRRGFAQVAIDAKVTKNAVQALIDKHQRIPGNIMSALLERFH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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