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Report for CCDS61483.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61483.1 Public Homo sapiens 14 MED6 24 110 108 CCDS HistoryNCBI Gene:10001Re-query CCDS DB by CCDS ID:61483.1Re-query CCDS DB by GeneID:10001See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61483.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440435.2 ENSP00000394502.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440435.2Link to Ensembl Protein Viewer:ENSP00000394502.2Re-query CCDS DB by Nucleotide ID:ENST00000440435Re-query CCDS DB by Protein ID:ENSP00000394502
Original member Current member NCBI NM_001284210.2 NP_001271139.1 Accepted alive Link to Nucleotide Sequence:NM_001284210.2Link to Protein Sequence:NP_001271139.1Re-query CCDS DB by Nucleotide ID:NM_001284210Re-query CCDS DB by Protein ID:NP_001271139Link to BLAST:NP_001271139.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271139.1 181 O75586-3 181 100% 0 0

Chromosomal Locations for CCDS 61483.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70584892 70584943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70585756 70585783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70592880 70592988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70593296 70593378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70596611 70596702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70597618 70597777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70600616 70600637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGGCGGCGGTGGATATCCGAGACAATCTGCTGGGAATTTCTTGGGTTGACAGCTCTTGGATCCCTATTT
TGAACAGTGGTAGTGTCCTGGATTACTTTTCAGAAAGAAGTAATCCTTTTTATGACAGAACATGTAATAA
TGAAGTGGTCAAAATGCAGAGGCTAACATTAGAACACTTGAATCAGATGGTTGGAATCGAGTACATCCTT
TTGCATGCTCAAGAGCCCATTCTTTTCATCATTCGGAAGCAACAGCGGCAGTCCCCTGCCCAAGTTATCC
CACTAGCTGATTACTATATCATTGCTGGAGTGATCTATCAGGCACCAGACTTGGGATCAGTTATAAACTC
TAGAGTGCTTACTGCAGTGCATGGTATTCAGTCAGCTTTTGATGAAGCTATGTCATACTGTCGATATCAT
CCTTCCAAAGGGTATTGGTGGCACTTCAAAGATCATGAAGAGCAAGCTAAAGCCTGGAGAAAAGCCTGTT
CCAGTGGATCAAACAAAGAAAGAGGCAGAACCTATACCAGAAACTGTAAAACCTGA

Translation (181 aa):
MAAVDIRDNLLGISWVDSSWIPILNSGSVLDYFSERSNPFYDRTCNNEVVKMQRLTLEHLNQMVGIEYIL
LHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSAFDEAMSYCRYH
PSKGYWWHFKDHEEQAKAWRKACSSGSNKERGRTYTRNCKT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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