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Report for CCDS61084.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61084.1 Public Homo sapiens 12 FAR2 24 110 108 CCDS HistoryNCBI Gene:55711Re-query CCDS DB by CCDS ID:61084.1Re-query CCDS DB by GeneID:55711See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61084.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000547116.5 ENSP00000449349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547116.5Link to Ensembl Protein Viewer:ENSP00000449349.1Re-query CCDS DB by Nucleotide ID:ENST00000547116Re-query CCDS DB by Protein ID:ENSP00000449349
Original member Current member EBI ENST00000690162.1 ENSP00000510233.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690162.1Link to Ensembl Protein Viewer:ENSP00000510233.1Re-query CCDS DB by Nucleotide ID:ENST00000690162Re-query CCDS DB by Protein ID:ENSP00000510233
Original member Current member NCBI NM_001271784.2 NP_001258713.1 Accepted alive Link to Nucleotide Sequence:NM_001271784.2Link to Protein Sequence:NP_001258713.1Re-query CCDS DB by Nucleotide ID:NM_001271784Re-query CCDS DB by Protein ID:NP_001258713Link to BLAST:NP_001258713.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258713.1 418 Q96K12-2 418 100% 0 0

Chromosomal Locations for CCDS 61084.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 29293402 29293475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29297021 29297200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29307658 29307835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29309186 29309230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29311028 29311146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29311883 29311950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29316841 29317012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29321795 29321924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29332600 29332727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29333632 29333794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGCAGGAGCTTCTCTCCTGTACAAACATAATATTTCACTGTGCAGCCACTGTACGCTTTGACGACACTC
TCAGACATGCTGTGCAACTTAACGTCACTGCCACCCGGCAGCTCTTGCTTATGGCTAGTCAGATGCCAAA
GCTGGAAGCCTTTATACATATCTCTACTGCCTATTCAAATTGTAACCTGAAGCACATCGATGAAGTTATC
TATCCGTGCCCTGTGGAGCCAAAAAAAATCATTGATTCCCTTGAGTGGTTAGACGATGCTATTATTGACG
AGATTACACCCAAGCTGATCAGAGATTGGCCCAATATTTATACCTACACCAAGGCCTTGGGAGAAATGGT
GGTGCAGCAAGAGAGCAGGAACCTGAACATTGCCATCATAAGGCCCTCCATTGTGGGAGCAACTTGGCAG
GAGCCTTTCCCAGGTTGGGTTGATAATATAAATGGACCTAATGGAATCATTATTGCGACTGGGAAAGGGT
TTCTTCGGGCCATAAAAGCTACTCCAATGGCTGTGGCAGACGTAATTCCAGTTGATACAGTCGTCAATCT
CATGCTAGCTGTAGGATGGTATACTGCAGTTCACAGACCTAAGTCAACATTAGTCTACCACATTACATCT
GGTAACATGAATCCCTGCAATTGGCACAAAATGGGAGTCCAAGTCTTGGCAACCTTTGAAAAAATCCCAT
TTGAGAGACCTTTCAGGAGGCCAAATGCTAATTTTACCAGCAACAGCTTCACATCACAGTACTGGAATGC
GGTCAGCCACCGGGCCCCTGCCATTATCTATGACTGCTATCTGCGGCTCACTGGAAGGAAGCCCAGGATG
ACAAAGCTCATGAATCGGCTTTTAAGAACTGTTTCCATGTTGGAGTATTTCATCAACCGGAGTTGGGAAT
GGAGCACGTACAATACAGAAATGCTGATGTCTGAGCTGAGTCCTGAAGACCAGAGAGTATTCAACTTTGA
CGTGCGCCAGTTGAACTGGTTGGAATACATTGAAAATTATGTTTTGGGAGTTAAAAAATACTTATTGAAA
GAGGATATGGCTGGGATCCCAAAAGCAAAGCAACGCTTAAAAAGGCTCCGAAATATTCACTACCTCTTTA
ATACTGCCCTCTTCCTTATCGCCTGGCGCCTTCTCATTGCAAGATCTCAGATGGCTCGGAATGTCTGGTT
CTTCATTGTAAGCTTCTGTTATAAATTCCTCTCCTACTTTAGAGCATCCAGCACGCTCAAAGTTTAA

Translation (418 aa):
MQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQMPKLEAFIHISTAYSNCNLKHIDEVI
YPCPVEPKKIIDSLEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQ
EPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITS
GNMNPCNWHKMGVQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLTGRKPRM
TKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLK
EDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLLIARSQMARNVWFFIVSFCYKFLSYFRASSTLKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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