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Report for CCDS60957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60957.1 Public Homo sapiens 11 DIXDC1 24 110 108 CCDS HistoryNCBI Gene:85458Re-query CCDS DB by CCDS ID:60957.1Re-query CCDS DB by GeneID:85458See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000529225.5 ENSP00000434130.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529225.5Link to Ensembl Protein Viewer:ENSP00000434130.1Re-query CCDS DB by Nucleotide ID:ENST00000529225Re-query CCDS DB by Protein ID:ENSP00000434130
Original member Current member NCBI NM_001278542.2 NP_001265471.1 Accepted alive Link to Nucleotide Sequence:NM_001278542.2Link to Protein Sequence:NP_001265471.1Re-query CCDS DB by Nucleotide ID:NM_001278542Re-query CCDS DB by Protein ID:NP_001265471Link to BLAST:NP_001265471.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265471.1 218 Q155Q3-5 218 100% 0 0

Chromosomal Locations for CCDS 60957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 111929854 111929910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111964549 111964678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111968513 111968638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111974023 111974254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 111974876 111974987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGGGGACCCAAGTGGTTATGAGATTCAATAACTCCTTGCTGCCAACAGAGCCTTCTCAACAGCTGCAGG
CCTATGTGGCCTGGGTGAATGCACAGCTGAAGAAGAGGCCAGCAGTGAAGCCTGTGCAGGACCTGCGACA
AGATCTCCGGGATGGGGTGATCCTGGCATATCTCATCGAGATTGTTGCAGGAGAAAAGCTGAGTGGGGTA
CAGCTGAGTCCCGGTAACCAACAGGAGATGAAGAATAATGTGGAGAAAGTGCTACAGTTTGTGGCCTCTA
AAAAGATTCGTATGCACCAGACTTCGGCTAAAGATATTGTGGATGGAAACCTGAAGTCTATCATGAGGCT
GGTCCTTGCCTTGGCAGCTCATTTCAAACCTGGCTCCAGCAGGACGGTGAACCAAGGACGGGACTCCAGA
GCCCCTCTGCAAAGTCACCGACCACACTGTGCCACTGCTGTTGCCCAGGGAGCAGCTGCTGCTCTGGCCG
ATGTGTGTCATGACATGTCCCGATCAGGACGGGATGTCTTTCGATATAGACAGAGGAACAGCAGCATGGA
TGAGGAAATTGAGAATCCATACTGGAGTGTGCGGGCCCTAGTGCAGCAGTACGAAGGGCAACAAAGGTCC
CCGTCTGAATCCAGCTGCTCCAGGTAA

Translation (218 aa):
MGTQVVMRFNNSLLPTEPSQQLQAYVAWVNAQLKKRPAVKPVQDLRQDLRDGVILAYLIEIVAGEKLSGV
QLSPGNQQEMKNNVEKVLQFVASKKIRMHQTSAKDIVDGNLKSIMRLVLALAAHFKPGSSRTVNQGRDSR
APLQSHRPHCATAVAQGAAAALADVCHDMSRSGRDVFRYRQRNSSMDEEIENPYWSVRALVQQYEGQQRS
PSESSCSR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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