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Report for CCDS60726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60726.1 Public Homo sapiens 11 MICAL2 24 110 108 CCDS HistoryNCBI Gene:9645Re-query CCDS DB by CCDS ID:60726.1Re-query CCDS DB by GeneID:9645See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60726.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000675839.1 ENSP00000502351.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675839.1Link to Ensembl Protein Viewer:ENSP00000502351.1Re-query CCDS DB by Nucleotide ID:ENST00000675839Re-query CCDS DB by Protein ID:ENSP00000502351
Original member Current member NCBI NM_001282664.1 NP_001269593.1 Accepted alive Link to Nucleotide Sequence:NM_001282664.1Link to Protein Sequence:NP_001269593.1Re-query CCDS DB by Nucleotide ID:NM_001282664Re-query CCDS DB by Protein ID:NP_001269593Link to BLAST:NP_001269593.1
Original member Current member NCBI NM_001346293.2 NP_001333222.1 Accepted alive Link to Nucleotide Sequence:NM_001346293.2Link to Protein Sequence:NP_001333222.1Re-query CCDS DB by Nucleotide ID:NM_001346293Re-query CCDS DB by Protein ID:NP_001333222Link to BLAST:NP_001333222.1
Original member Current member NCBI NM_001346294.2 NP_001333223.1 Accepted alive Link to Nucleotide Sequence:NM_001346294.2Link to Protein Sequence:NP_001333223.1Re-query CCDS DB by Nucleotide ID:NM_001346294Re-query CCDS DB by Protein ID:NP_001333223Link to BLAST:NP_001333223.1
Original member Current member NCBI NM_001346295.2 NP_001333224.1 Accepted alive Link to Nucleotide Sequence:NM_001346295.2Link to Protein Sequence:NP_001333224.1Re-query CCDS DB by Nucleotide ID:NM_001346295Re-query CCDS DB by Protein ID:NP_001333224Link to BLAST:NP_001333224.1
Original member Current member NCBI NM_001346296.2 NP_001333225.1 Accepted alive Link to Nucleotide Sequence:NM_001346296.2Link to Protein Sequence:NP_001333225.1Re-query CCDS DB by Nucleotide ID:NM_001346296Re-query CCDS DB by Protein ID:NP_001333225Link to BLAST:NP_001333225.1
Original member Current member NCBI NM_001346297.2 NP_001333226.1 Accepted alive Link to Nucleotide Sequence:NM_001346297.2Link to Protein Sequence:NP_001333226.1Re-query CCDS DB by Nucleotide ID:NM_001346297Re-query CCDS DB by Protein ID:NP_001333226Link to BLAST:NP_001333226.1
Original member Current member NCBI NM_001346298.2 NP_001333227.1 Accepted alive Link to Nucleotide Sequence:NM_001346298.2Link to Protein Sequence:NP_001333227.1Re-query CCDS DB by Nucleotide ID:NM_001346298Re-query CCDS DB by Protein ID:NP_001333227Link to BLAST:NP_001333227.1
Original member Current member NCBI NM_001346299.2 NP_001333228.1 Accepted alive Link to Nucleotide Sequence:NM_001346299.2Link to Protein Sequence:NP_001333228.1Re-query CCDS DB by Nucleotide ID:NM_001346299Re-query CCDS DB by Protein ID:NP_001333228Link to BLAST:NP_001333228.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269593.1 1103 O94851-3 1103 100% 0 0
NP_001333222.1 1103 O94851-3 1103 100% 0 0
NP_001333223.1 1103 O94851-3 1103 100% 0 0
NP_001333224.1 1103 O94851-3 1103 100% 0 0
NP_001333225.1 1103 O94851-3 1103 100% 0 0
NP_001333226.1 1103 O94851-3 1103 100% 0 0
NP_001333227.1 1103 O94851-3 1103 100% 0 0
NP_001333228.1 1103 O94851-3 1103 100% 0 0

Chromosomal Locations for CCDS 60726.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 12162156 12162419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12204250 12204457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12208023 12208139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12209497 12209598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12213255 12213410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12216219 12216319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12220201 12220458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12221644 12221759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12222617 12222743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12223411 12223501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12224673 12224820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12226171 12226370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12227025 12227131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12236177 12236245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12239436 12239585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12241040 12241162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12242214 12242432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12242671 12242772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12243987 12244112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12255643 12255750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12256785 12256971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12258468 12258556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12259795 12259897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 12262480 12262520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3312 nt):
ATGGGGGAAAACGAGGATGAGAAGCAGGCCCAGGCGGGGCAGGTTTTTGAGAACTTTGTCCAGGCATCCA
CGTGCAAAGGTACCCTCCAGGCCTTCAACATTCTCACACGACACCTGGACCTAGACCCTCTGGACCACAG
AAACTTTTATTCCAAGCTCAAGTCCAAGGTGACCACCTGGAAAGCCAAAGCCCTGTGGTACAAATTGGAT
AAGCGTGGTTCCCACAAAGAGTATAAGCGAGGGAAGTCGTGCACGAACACCAAGTGTCTCATAGTTGGGG
GAGGACCCTGTGGCTTGCGCACTGCCATTGAACTTGCCTACCTGGGAGCCAAAGTGGTCGTGGTGGAGAA
GAGGGACTCCTTCTCCCGGAACAACGTGCTACACCTCTGGCCTTTCACCATCCATGACCTTCGTGGCCTG
GGAGCCAAGAAGTTCTATGGGAAGTTCTGTGCTGGCTCCATCGACCATATCAGTATTCGCCAACTACAGC
TCATCCTATTCAAGGTGGCCCTGATGCTGGGAGTTGAAATCCATGTGAATGTGGAGTTCGTGAAGGTTCT
AGAGCCTCCTGAAGATCAAGAAAATCAAAAAATTGGCTGGCGGGCAGAATTTCTCCCTACAGACCATTCT
CTGTCGGAGTTTGAGTTTGACGTCATCATTGGTGCCGATGGCCGCAGGAACACCCTGGAAGGGTTCAGAA
GAAAAGAATTCCGTGGGAAGCTGGCGATTGCCATCACCGCCAACTTCATAAACAGAAACAGCACAGCGGA
AGCCAAGGTGGAAGAGATTAGTGGTGTGGCTTTCATCTTCAATCAGAAATTTTTTCAGGACCTTAAAGAA
GAAACAGGCATAGATCTTGAGAACATTGTTTACTACAAGGACTGCACCCACTATTTTGTAATGACAGCCA
AGAAGCAGAGCCTGCTCGACAAAGGTGTCATCATTAACGACTACATCGACACAGAGATGCTGCTGTGTGC
GGAGAACGTGAACCAAGACAACCTGCTATCCTATGCCCGGGAAGCTGCAGACTTTGCCACCAACTACCAG
CTGCCATCCTTAGACTTTGCCATGAACCACTATGGGCAGCCTGATGTGGCCATGTTTGACTTTACCTGCA
TGTATGCCTCAGAGAACGCGGCCCTGGTGCGGGAGCGGCAGGCGCACCAGCTGCTCGTGGCCCTTGTGGG
TGACAGCTTGCTTGAGCCATTTTGGCCCATGGGTACAGGCTGTGCCCGTGGCTTCCTGGCAGCCTTTGAC
ACGGCATGGATGGTGAAGAGCTGGAACCAGGGCACCCCTCCCCTGGAGCTGCTGGCTGAAAGGGAAAGTC
TCTACCGGCTGTTACCTCAGACAACCCCGGAGAACATCAACAAGAACTTTGAGCAGTACACGTTGGACCC
AGGGACACGGTACCCAAACCTCAACTCACACTGTGTCAGGCCCCATCAGGTGAAGCATTTGTATATCACT
AAGGAGCTGGAGCACTACCCTCTCGAGAGACTGGGCTCGGTGAGGAGATCTGTCAACCTCTCCAGGAAGG
AGTCAGATATCCGGCCCAGCAAGCTCCTGACCTGGTGCCAGCAGCAGACAGAGGGCTACCAGCATGTCAA
CGTCACCGACCTGACCACATCCTGGCGCAGTGGGTTGGCCCTGTGTGCCATCATCCACCGCTTCCGGCCT
GAGCTCATCAACTTTGACTCTTTGAATGAAGATGATGCTGTGGAGAACAACCAGCTCGCATTTGATGTGG
CCGAGCGAGAGTTTGGGATCCCTCCAGTGACCACGGGCAAAGAGATGGCATCTGCCCAGGAGCCTGACAA
GCTCAGCATGGTCATGTACCTCTCCAAGTTCTACGAGCTCTTCCGGGGCACCCCACTGAGGCCCGTGGAT
TCTTGGCGCAAAAACTATGGAGAAAATGCTGACCTCAGCTTGGCCAAATCATCCATTTCTAATAACTATC
TCAACCTCACATTTCCAAGGAAGAGGACTCCACGGGTGGATGGTCAAACCGGAGAGAATGACATGAACAA
ACGGAGACGGAAGGGCTTCACCAACCTGGACGAGCCTTCAAACTTTTCCAGCCGTAGCTTGGGCTCCAAT
CAAGAGTGTGGGAGCAGTAAGGAAGGTGGAAATCAGAACAAAGTCAAGTCCATGGCGAATCAGCTGCTGG
CCAAGTTTGAGGAGAGCACTCGGAACCCCTCACTCATGAAGCAGGAACGCCGTGTCTCAGGGATAGGTAA
GCCGGTCCTGTGCTCTTCCTCCGGCCCTCCTGTTCACTCTTGCTGCCCCAAGCCGGAGGAGGCCACACCC
AGCCCATCACCTCCTCTGAAAAGGCAGTTCCCCTCTGTGGTCGTGACGGGGCACGTGCTCAGAGAGCTCA
AGCAAGTGTCTGCTGGCAGTGAGTGCCTGAGCAGACCTTGGAGAGCCAGAGCCAAGTCTGACCTACAGCT
GGGTGGGACAGAAAATTTCGCTACCCTGCCTTCTACCCGCCCGAGGGCGCAGGCTCTTTCCGGGGTGCTG
TGGCGGCTGCAGCAAGTGGAGGAAAAGATTCTCCAGAAGAGGGCTCAGAACTTGGCCAACAGGGAATTTC
ACACAAAGAACATTAAGGAGAAGGCGGCTCACCTTGCCTCCATGTTTGGACACGGGGATTTCCCGCAGAA
TAAACTACTCTCTAAAGGCCTGTCTCATACTCATCCTCCATCTCCTCCCTCTCGCCTTCCGTCTCCTGAT
CCAGCTGCTTCTTCCTCTCCATCAACTGTTGACTCTGCTTCTCCTGCCAGAAAGCTGACGGTAGGGAAAG
TGTCCAGCGGAATAGGGGCTGCAGCTGAAGTCCTGGTCAATCTGTACATGAATGATCACAGACCTAAGGC
CCAGGCCACCTCTCCAGACCTGGAATCTATGCGAAAGTCATTTCCCCTTAACCTGGGAGGCAGCGACACG
TGTTACTTCTGTAAGAAACGTGTGTACGTGATGGAACGGCTGAGCGCCGAGGGCCACTTCTTCCACCGGG
AGTGTTTCCGCTGCAGCATCTGTGCCACCACCTTGCGCCTGGCCGCCTACACCTTTGACTGCGATGAAGG
CAAATTTTACTGCAAGCCTCACTTCATTCACTGTAAAACCAATAGCAAACAACGGAAGAGACGGGCAGAG
TTGAAGCAACAAAGAGAGGAGGAGGCAACATGGCAAGAGCAGGAAGCCCCTCGGAGAGACACTCCCACCG
AAAGTTCTTGCGCAGTGGCCGCCATTGGCACCCTGGAAGGCAGCCCCCCAGTTCATTTCAGCCTTCCAGT
GCTACACCCACTTCTTGGCTGA

Translation (1103 aa):
MGENEDEKQAQAGQVFENFVQASTCKGTLQAFNILTRHLDLDPLDHRNFYSKLKSKVTTWKAKALWYKLD
KRGSHKEYKRGKSCTNTKCLIVGGGPCGLRTAIELAYLGAKVVVVEKRDSFSRNNVLHLWPFTIHDLRGL
GAKKFYGKFCAGSIDHISIRQLQLILFKVALMLGVEIHVNVEFVKVLEPPEDQENQKIGWRAEFLPTDHS
LSEFEFDVIIGADGRRNTLEGFRRKEFRGKLAIAITANFINRNSTAEAKVEEISGVAFIFNQKFFQDLKE
ETGIDLENIVYYKDCTHYFVMTAKKQSLLDKGVIINDYIDTEMLLCAENVNQDNLLSYAREAADFATNYQ
LPSLDFAMNHYGQPDVAMFDFTCMYASENAALVRERQAHQLLVALVGDSLLEPFWPMGTGCARGFLAAFD
TAWMVKSWNQGTPPLELLAERESLYRLLPQTTPENINKNFEQYTLDPGTRYPNLNSHCVRPHQVKHLYIT
KELEHYPLERLGSVRRSVNLSRKESDIRPSKLLTWCQQQTEGYQHVNVTDLTTSWRSGLALCAIIHRFRP
ELINFDSLNEDDAVENNQLAFDVAEREFGIPPVTTGKEMASAQEPDKLSMVMYLSKFYELFRGTPLRPVD
SWRKNYGENADLSLAKSSISNNYLNLTFPRKRTPRVDGQTGENDMNKRRRKGFTNLDEPSNFSSRSLGSN
QECGSSKEGGNQNKVKSMANQLLAKFEESTRNPSLMKQERRVSGIGKPVLCSSSGPPVHSCCPKPEEATP
SPSPPLKRQFPSVVVTGHVLRELKQVSAGSECLSRPWRARAKSDLQLGGTENFATLPSTRPRAQALSGVL
WRLQQVEEKILQKRAQNLANREFHTKNIKEKAAHLASMFGHGDFPQNKLLSKGLSHTHPPSPPSRLPSPD
PAASSSPSTVDSASPARKLTVGKVSSGIGAAAEVLVNLYMNDHRPKAQATSPDLESMRKSFPLNLGGSDT
CYFCKKRVYVMERLSAEGHFFHRECFRCSICATTLRLAAYTFDCDEGKFYCKPHFIHCKTNSKQRKRRAE
LKQQREEEATWQEQEAPRRDTPTESSCAVAAIGTLEGSPPVHFSLPVLHPLLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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