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Report for CCDS60553.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60553.1 Public Homo sapiens 10 NUDT13 24 110 108 CCDS HistoryNCBI Gene:25961Re-query CCDS DB by CCDS ID:60553.1Re-query CCDS DB by GeneID:25961See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60553.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544879.5 ENSP00000440760.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544879.5Link to Ensembl Protein Viewer:ENSP00000440760.1Re-query CCDS DB by Nucleotide ID:ENST00000544879Re-query CCDS DB by Protein ID:ENSP00000440760
Original member Current member NCBI NM_001283016.2 NP_001269945.1 Accepted alive Link to Nucleotide Sequence:NM_001283016.2Link to Protein Sequence:NP_001269945.1Re-query CCDS DB by Nucleotide ID:NM_001283016Re-query CCDS DB by Protein ID:NP_001269945Link to BLAST:NP_001269945.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269945.1 226 Q86X67-3 226 100% 0 0

Chromosomal Locations for CCDS 60553.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73124234 73124320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73125118 73125243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73125398 73125509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73126673 73126827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73130703 73130903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGAGACAGAGCTCAAGGGGTCTTTCATTGAGCTGAGAAAGGCACTCTTTCAACTCAATGCAAGGGATG
CCTCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGGCATGATGCTCATCAGTTCTGCAGCAGAAGTGG
GCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTGCCCTTCCAATAATATAATCTATTATCCA
CAGATGGCTCCTGTGGCGATCACGCTGGTGTCAGATGGGACCCGATGCCTGCTTGCCCGCCAAAGCTCCT
TTCCCAAGGGAATGTATTCTGCCTTGGCAGGTTTTTGTGATATAGGTGAAAGTGTGGAAGAGACCATCCG
CCGAGAAGTTGCAGAAGAGGTGGGATTGGAGGTGGAAAGCCTGCAGTACTATGCATCCCAGCATTGGCCC
TTCCCTAGTGGCTCACTCATGATTGCTTGCCATGCAACTGTGAAACCAGGGCAGACAGAAATCCAGGTGA
ACTTGAGAGAATTAGAGACAGCTGCCTGGTTCAGTCATGATGAGGTAGCCACAGCCCTGAAGAGAAAGGG
CCCCTATACTCAGCAACAGAATGGGACTTTCCCATTCTGGCTGCCCCCTAAGTTAGCCATCTCCCACCAA
CTGATTAAGGAGTGGGTGGAAAAACAGACCTGTTCTTCCCTGCCTGCTTAG

Translation (226 aa):
METELKGSFIELRKALFQLNARDASLLSTAQALLRWHDAHQFCSRSGQPTKKNVAGSKRVCPSNNIIYYP
QMAPVAITLVSDGTRCLLARQSSFPKGMYSALAGFCDIGESVEETIRREVAEEVGLEVESLQYYASQHWP
FPSGSLMIACHATVKPGQTEIQVNLRELETAAWFSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQ
LIKEWVEKQTCSSLPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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