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Report for CCDS60219.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60219.1 Public Homo sapiens 1 DENND2D 24 110 108 CCDS HistoryNCBI Gene:79961Re-query CCDS DB by CCDS ID:60219.1Re-query CCDS DB by GeneID:79961See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60219.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369752.5 ENSP00000358767.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369752.5Link to Ensembl Protein Viewer:ENSP00000358767.5Re-query CCDS DB by Nucleotide ID:ENST00000369752Re-query CCDS DB by Protein ID:ENSP00000358767
Original member Current member NCBI NM_001271833.2 NP_001258762.1 Accepted alive Link to Nucleotide Sequence:NM_001271833.2Link to Protein Sequence:NP_001258762.1Re-query CCDS DB by Nucleotide ID:NM_001271833Re-query CCDS DB by Protein ID:NP_001258762Link to BLAST:NP_001258762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258762.1 468 Q9H6A0-2 468 100% 0 0

Chromosomal Locations for CCDS 60219.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 111187605 111187681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111188131 111188370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111188702 111188786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111189212 111189253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111192140 111192317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111194578 111194726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111195916 111196056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111197176 111197253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111197920 111197989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111198630 111198742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111199623 111199798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111204296 111204353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGATGGGCTCGGCCGCCGCCTTCGAGCCAGCCTGAGACTGAAGCGCGGCCATGGGGGACCACCCCAGG
ACAATTCAGGGGAAGCTTTAAAGGAACCAGAAAGGGCCCAGGAGCACTCTTTGCCCAACTTTGCTGGGGG
GCAGCACTTCTTTGAATACCTTCTTGTGGTTTCTCTCAAAAAGAAGCGTTCAGAGGATGATTACGAGCCT
ATAATCACCTACCAATTTCCCAAGCGGGAGAACCTGCTTCGGGGTCAGCAGGAGGAGGAGGAGCGGCTGC
TCAAAGCTATCCCCTTGTTCTGCTTCCCAGATGGGAATGAGTGGGCATCACTCACCGAGTATCCCAGGGA
GACCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGCGCCTCTTGCCT
GCCGGCCCTGGCCCTCGCCTTCCCAAAGTGTACTGCATCATCAGCTGCATCGGCTGCTTCGGCTTGTTCT
CCAAGATCCTGGATGAAGTGGAGAAGAGACATCAGATCTCCATGGCTGTCATCTACCCGTTCATGCAGGG
CCTCCGAGAGGCAGCCTTCCCTGCTCCTGGGAAGACTGTCACTCTCAAGAGCTTCATCCCCGACTCAGGC
ACTGAGTTCATTTCACTGACACGGCCCCTGGACTCCCACCTAGAACATGTGGATTTTAGTTCTCTATTGC
ACTGTCTCAGTTTTGAACAGATACTTCAGATCTTTGCCTCTGCCGTGCTGGAGAGAAAAATCATCTTCCT
GGCGGAAGGTCTCAGCACCTTGTCTCAGTGCATCCATGCTGCTGCCGCACTGCTCTACCCCTTCAGCTGG
GCGCACACCTACATCCCTGTTGTCCCTGAGAGCCTTCTGGCCACCGTCTGCTGCCCCACCCCCTTCATGG
TTGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAGCCCTATGGAAGAGGTCCTGCTGGTCAATCT
TTGTGAAGGAACCTTCTTAATGTCGGTTGGTGATGAAAAAGACATCCTGCCACCGAAGCTTCAGGATGAC
ATCTTAGACTCTCTTGGTCAGGGGATCAATGAGTTAAAGACTGCAGAACAAATCAACGAGCATGTTTCAG
GCCCCTTTGTGCAGTTCTTTGTCAAGATTGTGGGCCATTATGCTTCCTATATCAAGCGGGAGGCAAATGG
GCAAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGATTTGTGAAG
AAGTTTGTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAGCAAGAATCCTCCTGCAG
GCTATTTCCAACAGAAAATACTTGAATATGAGGAACAGAAGAAACAGAAGAAACCAAGGGAAAAAACTGT
GAAATAA

Translation (468 aa):
MDGLGRRLRASLRLKRGHGGPPQDNSGEALKEPERAQEHSLPNFAGGQHFFEYLLVVSLKKKRSEDDYEP
IITYQFPKRENLLRGQQEEEERLLKAIPLFCFPDGNEWASLTEYPRETFSFVLTNVDGSRKIGYCRRLLP
AGPGPRLPKVYCIISCIGCFGLFSKILDEVEKRHQISMAVIYPFMQGLREAAFPAPGKTVTLKSFIPDSG
TEFISLTRPLDSHLEHVDFSSLLHCLSFEQILQIFASAVLERKIIFLAEGLSTLSQCIHAAAALLYPFSW
AHTYIPVVPESLLATVCCPTPFMVGVQMRFQQEVMDSPMEEVLLVNLCEGTFLMSVGDEKDILPPKLQDD
ILDSLGQGINELKTAEQINEHVSGPFVQFFVKIVGHYASYIKREANGQGHFQERSFCKALTSKTNRRFVK
KFVKTQLFSLFIQEAEKSKNPPAGYFQQKILEYEEQKKQKKPREKTVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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