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Report for CCDS60214.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60214.1 Public Homo sapiens 1 CLCC1 24 110 108 CCDS HistoryNCBI Gene:23155Re-query CCDS DB by CCDS ID:60214.1Re-query CCDS DB by GeneID:23155See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60214.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348264.6 ENSP00000337243.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000348264.6Link to Ensembl Protein Viewer:ENSP00000337243.2Re-query CCDS DB by Nucleotide ID:ENST00000348264Re-query CCDS DB by Protein ID:ENSP00000337243
Original member Current member NCBI NM_001278203.1 NP_001265132.1 Accepted alive Link to Nucleotide Sequence:NM_001278203.1Link to Protein Sequence:NP_001265132.1Re-query CCDS DB by Nucleotide ID:NM_001278203Re-query CCDS DB by Protein ID:NP_001265132Link to BLAST:NP_001265132.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265132.1 366 Q96S66-4 366 100% 0 0

Chromosomal Locations for CCDS 60214.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108934670 108934942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108937077 108937418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108939636 108939782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108947611 108947718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108949820 108949921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108950309 108950437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1101 nt):
ATGCTGTGTTCTTTGCTCCTTTGTGAATGTCTGTTGCTGGTAGCTGGTTATGCTCATGATGATGACTGGA
TTGACCCCACAGACATGCTTAACTATGATGCTGCTTCAGGAACAATGAGAAAATCTCAGGCAAAATATGG
TATTTCAGGGGAAAAGGATGTCAGTCCTGACTTGTCATGTGCTGATGAAATATCAGAATGTTATCACAAA
CTTGATTCTTTAACTTATAAGATTGATGAGTGTGAAAAGAAAAAGAGGGAAGACTATGAAAGTCAAAGCA
ATCCTGTTTTTAGGAGATACTTAAATAAGATTTTAATTGAAGCTGGAAAGCTTGGACTTGCACTTGCAGT
TACATTCACCACATTTGTAACGGAGCCATTGAAGCATATTGGAAAAGGAACTGGGGAATTTATTAAAGCA
CTCATGAAGGAAATTCCAGCGCTGCTTCATCTTCCAGTGCTGATAATTATGGCATTAGCCATCCTGAGTT
TCTGCTATGGTGCTGGAAAATCAGTTCATGTGCTGAGACATATAGGCGGTCCTGAGAGCGAACCTCCCCA
GGCACTTCGGCCACGGGATAGAAGACGGCAGGAGGAAATTGATTATAGACCTGATGGTGGAGCAGGTGAT
GCCGATTTCCATTATAGGGGCCAAATGGGCCCCACTGAGCAAGGCCCTTATGCCAAAACGTATGAGGGTA
GAAGAGAGATTTTGAGAGAGAGAGATGTTGACTTGAGATTTCAGACTGGCAACAAGAGCCCTGAAGTGCT
CCGGGCATTTGATGTACCAGACGCAGAGGCACGAGAGCATCCCACGGTGGTACCCAGTCATAAATCACCT
GTTTTGGATACAAAGCCCAAGGAGACAGGTGGAATCCTGGGGGAAGGCACACCGAAAGAAAGCAGTACTG
AAAGCAGCCAGTCGGCCAAGCCTGTCTCTGGCCAAGACACATCAGGGAATACAGAAGGTTCACCCGCAGC
GGAAAAGGCCCAGCTCAAGTCTGAAGCCGCAGGCAGCCCAGACCAAGGCAGCACATACAGCCCCGCAAGA
GGTGTGGCTGGACCACGTGGACAGGATCCGGTCAGCAGCCCCTGTGGCTAG

Translation (366 aa):
MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSCADEISECYHK
LDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLALAVTFTTFVTEPLKHIGKGTGEFIKA
LMKEIPALLHLPVLIIMALAILSFCYGAGKSVHVLRHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGD
ADFHYRGQMGPTEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSP
VLDTKPKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPAR
GVAGPRGQDPVSSPCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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