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Report for CCDS60061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60061.1 Public Homo sapiens 1 ZCCHC17 24 110 108 CCDS HistoryNCBI Gene:51538Re-query CCDS DB by CCDS ID:60061.1Re-query CCDS DB by GeneID:51538See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60061.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546109.5 ENSP00000444742.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546109.5Link to Ensembl Protein Viewer:ENSP00000444742.1Re-query CCDS DB by Nucleotide ID:ENST00000546109Re-query CCDS DB by Protein ID:ENSP00000444742
Original member Current member NCBI NM_001282569.2 NP_001269498.1 Accepted alive Link to Nucleotide Sequence:NM_001282569.2Link to Protein Sequence:NP_001269498.1Re-query CCDS DB by Nucleotide ID:NM_001282569Re-query CCDS DB by Protein ID:NP_001269498Link to BLAST:NP_001269498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269498.1 233 Q9NP64-3 233 100% 0 0

Chromosomal Locations for CCDS 60061.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 31318195 31318236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 31319109 31319166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 31337175 31337275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 31338957 31339048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 31346640 31346740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 31348829 31348974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 31364032 31364193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGAAGCAGCTAATTGAAGACACTGAAAAGAATAAAGTTTATGTTGCTATGGTGACAGACTATGGGGCCT
TTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTCGGGTGGA
TAAGCCCTCTGAGATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAAT
GATAGAATAAAAGTATCCCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACA
ATGTTATCATTGAGCAAGAAGAGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCACCCT
TGAGGCTGTCTTGAACACTACCTGCAAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATG
CAACCAGGTGGGACTAAATACTCTCTGATACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAG
AGTTTGAGAAGCCTGACCCTACAAGGAATCCTTCTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACA
TAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGACTCTGAGAGTGATACAGGCAAGAGGGCAAGGCAC
ACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAAGAAGAAGCACAAGAAGAAGCACAAGGAGT
GA

Translation (233 aa):
MKQLIEDTEKNKVYVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKN
DRIKVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFM
QPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARH
TSKDSKAAKKKKKKKKHKKKHKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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