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Report for CCDS5939.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5939.1 Public Homo sapiens 7 INSIG1 24 110 108 CCDS HistoryNCBI Gene:3638Re-query CCDS DB by CCDS ID:5939.1Re-query CCDS DB by GeneID:3638See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5939.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342407.5 ENSP00000344035.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342407.5Link to Ensembl Protein Viewer:ENSP00000344035.5Re-query CCDS DB by Nucleotide ID:ENST00000342407Re-query CCDS DB by Protein ID:ENSP00000344035
Original member Current member NCBI NM_001346593.2 NP_001333522.1 Accepted alive Link to Nucleotide Sequence:NM_001346593.2Link to Protein Sequence:NP_001333522.1Re-query CCDS DB by Nucleotide ID:NM_001346593Re-query CCDS DB by Protein ID:NP_001333522Link to BLAST:NP_001333522.1
Original member Current member NCBI NM_198337.4 NP_938151.1 Accepted alive Link to Nucleotide Sequence:NM_198337.4Link to Protein Sequence:NP_938151.1Re-query CCDS DB by Nucleotide ID:NM_198337Re-query CCDS DB by Protein ID:NP_938151Link to BLAST:NP_938151.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333522.1 164 O15503-2 164 100% 0 0
NP_938151.1 164 O15503-2 164 100% 0 0

Chromosomal Locations for CCDS 5939.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 155298286 155298697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 155302747 155302829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGCCCAGATTGCACGACCACTTCTGGAGCTGCTCCTGTGCGCACAGCGCGAGGCGCCGAGGCCCCCCGC
GAGCCAGCGCCGCGGGGCTGGCGGCCAAGGTTGGGGAGATGATCAACGTTTCCGTGTCCGGGCCCTCCCT
GCTGGCGGCCCACGGTGCCCCGGACGCTGACCCCGCGCCCAGGGGCCGCAGTGCTGCGATGAGCGGCCCC
GAGCCCGGCAGCCCCTACCCCAACACCTGGCATCATCGCCTGTTGCAGAGGAGCCTCGTGCTCTTCTCGG
TTGGGGTGGTCCTAGCCCTGGTGCTCAACCTGCTGCAGATCCAGAGGAATGTCACTCTCTTCCCCGAGGA
GGTGATCGCCACCATCTTTTCCTCCGCCTGGTGGGTCCCTCCCTGCTGCGGGACAGCAGCTGGTATACAT
CCCCAGATTTCCTCTATATTCGTTCTTGGCTCCCTTGTATATTTTTCTCAGGAGGCGTCACGGTGGGGAA
CATAG

Translation (164 aa):
MPRLHDHFWSCSCAHSARRRGPPRASAAGLAAKVGEMINVSVSGPSLLAAHGAPDADPAPRGRSAAMSGP
EPGSPYPNTWHHRLLQRSLVLFSVGVVLALVLNLLQIQRNVTLFPEEVIATIFSSAWWVPPCCGTAAGIH
PQISSIFVLGSLVYFSQEASRWGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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