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Report for CCDS59356.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59356.1 Public Homo sapiens 19 RTBDN 24 110 108 CCDS HistoryNCBI Gene:83546Re-query CCDS DB by CCDS ID:59356.1Re-query CCDS DB by GeneID:83546See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59356.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000589272.5 ENSP00000468697.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589272.5Link to Ensembl Protein Viewer:ENSP00000468697.1Re-query CCDS DB by Nucleotide ID:ENST00000589272Re-query CCDS DB by Protein ID:ENSP00000468697
Original member Current member NCBI NM_001270440.2 NP_001257369.1 Accepted alive Link to Nucleotide Sequence:NM_001270440.2Link to Protein Sequence:NP_001257369.1Re-query CCDS DB by Nucleotide ID:NM_001270440Re-query CCDS DB by Protein ID:NP_001257369Link to BLAST:NP_001257369.1

Chromosomal Locations for CCDS 59356.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12826607 12826666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12826775 12826871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12828657 12828767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12828869 12828953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12829811 12829997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12834785 12834846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12835083 12835098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGGACGAAGCCCTAGAAACGCAGCTGAAGACGAGCAGAGGACGCTTCTCGGCTACAGAATCCCTCCCCA
CCTTGGAGCTCTTATCTCAGGTGGACATGGACTGCAGGGTCCACATGCGACCCATCGGCCTGACGTGGGT
GCTGCAACTGACCTTGGCATGGATCCTGCTAGAAGCCTGTGGAGGGAGCCGCCCACTCCAAGCCAGGTCC
CAGCAACACCATGGGCTGGCAGCTGATCTGGGCAAAGGCAAGCTGCACCTGGCAGGACCTTGTTGTCCCT
CAGAGATGGACACAACAGAGACATCGGGCCCTGGAAACCATCCAGAACGCTGTGGAGTGCCGAGCCCTGA
ATGCGAATCCTTCCTGGAACACCTCCAACGTGCCCTTCGCAGTCGCTTCCGCCTGCGGCTATTGGGGGTA
CGCCAGGCACAGCCGCTCTGCGAGGAGCTCTGCCAGGCCTGGTTCGCCAACTGCGAAGATGATATCACCT
GCGGCCCGACTTGGCTCCCACTCTCAGAAAAAAGGGGCTGTGAGCCCAGCTGCCTTACCTATGGACAGGC
TGGAGTGCAGTGGCGCGATCTCAGCTCGATGCAACCTCCGCCTCCGGGGTTCAAGTGA

Translation (205 aa):
MDEALETQLKTSRGRFSATESLPTLELLSQVDMDCRVHMRPIGLTWVLQLTLAWILLEACGGSRPLQARS
QQHHGLAADLGKGKLHLAGPCCPSEMDTTETSGPGNHPERCGVPSPECESFLEHLQRALRSRFRLRLLGV
RQAQPLCEELCQAWFANCEDDITCGPTWLPLSEKRGCEPSCLTYGQAGVQWRDLSSMQPPPPGFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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