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Report for CCDS59328.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59328.1 Public Homo sapiens 19 PLK5 24 110 108 CCDS HistoryNCBI Gene:126520Re-query CCDS DB by CCDS ID:59328.1Re-query CCDS DB by GeneID:126520See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59328.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334770.9 ENSP00000466248.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000334770.9Link to Ensembl Protein Viewer:ENSP00000466248.1Re-query CCDS DB by Nucleotide ID:ENST00000334770Re-query CCDS DB by Protein ID:ENSP00000466248
Original member Current member EBI ENST00000454744.7 ENSP00000468376.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000454744.7Link to Ensembl Protein Viewer:ENSP00000468376.1Re-query CCDS DB by Nucleotide ID:ENST00000454744Re-query CCDS DB by Protein ID:ENSP00000468376
Original member Current member EBI ENST00000673796.1 ENSP00000501198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000673796.1Link to Ensembl Protein Viewer:ENSP00000501198.1Re-query CCDS DB by Nucleotide ID:ENST00000673796Re-query CCDS DB by Protein ID:ENSP00000501198
Original member Current member NCBI NM_001243079.2 NP_001230008.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243079.2Link to Protein Sequence:NP_001230008.1Re-query CCDS DB by Nucleotide ID:NM_001243079Re-query CCDS DB by Protein ID:NP_001230008Link to BLAST:NP_001230008.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230008.1 336 Q496M5-1 336 100% 0 0

Chromosomal Locations for CCDS 59328.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1526997 1526998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1527936 1528134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1528302 1528428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1528898 1528974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1529406 1529490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1529747 1529824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1531738 1531883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1533931 1534041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1535065 1535250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1011 nt):
ATGTACACGGTGCTGACTGGCACCCCACCCTTCATGGCCTCACCCCTGTCGGAGATGTACCAAAACATCC
GTGAGGGCCACTACCCCGAACCCGCTCACCTGTCTGCCAATGCGCGCCGCCTCATCGTGCACCTCCTAGC
ACCCAACCCGGCCGAGCGGCCCAGCCTGGACCACCTGCTGCAGGACGACTTCTTCACACAGGGTTTCACT
CCAGACCGGCTGCCGGCCCACTCCTGCCACAGTCCCCCCATCTTCGCCATACCCCCGCCTCTGGGCAGGA
TCTTCCGGAAGGTGGGCCAGCGGCTGCTCACCCAGTGCCGGCCACCCTGCCCCTTCACGCCTAAAGAGGC
CTCGGGTCCAGGAGAAGGTGGGCCAGACCCTGACTCCATGGAGTGGGACGGCGAGAGCTCCCTGTCTGCG
AAAGAGGTTCCCTGCCTGGAAGGCCCCATCCACCTGGTCGCACAAGGGACCCTGCAGAGTGACCTGGCCG
GGCCCGAGGGGAGCCGGCGGCCAGAGGTGGAGGCGGCCCTCAGACACCTGCAGCTGTGCCTGGATGTAGG
CCCCCCGGCCACACAGGACCCCCTGGGAGAGCAGCAGCCCATCCTCTGGGCCCCCAAATGGGTGGATTAT
TCCAGCAAATACGGCTTTGGCTACCAGCTCTTGGACGGGGGGCGCACGGGACGGCACCCACATGGCCCTG
CGACCCCCCGGAGGGAGGGGACCCTCCCCACACCTGTGCCACCTGCTGGACCCGGCCTCTGCCTCCTGCG
CTTCCTGGCCTCTGAGCACGCCCTGCTGCTGCTGTTCAGCAATGGGATGGTGCAGGTGAGCTTCAGTGGA
GTCCCGGCCCAACTGGTGCTGAGTGGCGAGGGTGAGGGTTTGCAGCTCACCCTCTGGGAGCAGGGGTCCC
CTGGCACCTCCTACTCCCTGGACGTCCCGCGGAGCCACGGCTGCGCCCCCACCACCGGACAGCACCTTCA
CCACGCCCTCCGCATGCTGCAGAGTATCTAG

Translation (336 aa):
MYTVLTGTPPFMASPLSEMYQNIREGHYPEPAHLSANARRLIVHLLAPNPAERPSLDHLLQDDFFTQGFT
PDRLPAHSCHSPPIFAIPPPLGRIFRKVGQRLLTQCRPPCPFTPKEASGPGEGGPDPDSMEWDGESSLSA
KEVPCLEGPIHLVAQGTLQSDLAGPEGSRRPEVEAALRHLQLCLDVGPPATQDPLGEQQPILWAPKWVDY
SSKYGFGYQLLDGGRTGRHPHGPATPRREGTLPTPVPPAGPGLCLLRFLASEHALLLLFSNGMVQVSFSG
VPAQLVLSGEGEGLQLTLWEQGSPGTSYSLDVPRSHGCAPTTGQHLHHALRMLQSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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