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Report for CCDS59270.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59270.1 Public Homo sapiens 16 MARVELD3 24 110 108 CCDS HistoryNCBI Gene:91862Re-query CCDS DB by CCDS ID:59270.1Re-query CCDS DB by GeneID:91862See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59270.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000565261.1 ENSP00000455845.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565261.1Link to Ensembl Protein Viewer:ENSP00000455845.1Re-query CCDS DB by Nucleotide ID:ENST00000565261Re-query CCDS DB by Protein ID:ENSP00000455845
Original member Current member NCBI NM_001271329.2 NP_001258258.1 Accepted alive Link to Nucleotide Sequence:NM_001271329.2Link to Protein Sequence:NP_001258258.1Re-query CCDS DB by Nucleotide ID:NM_001271329Re-query CCDS DB by Protein ID:NP_001258258Link to BLAST:NP_001258258.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258258.1 148 Q96A59-3 148 100% 0 0

Chromosomal Locations for CCDS 59270.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 71626230 71626533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71629367 71629494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71640390 71640404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGGAAGATCCGTCGGGGGCTCGCGAGCCCCGGGCCCGGCCGAGAGAGCGGGACCCGGGACGGCGCCCCC
ACCCAGACCAAGGCCGCACCCACGATCGACCGCGGGACCGACCCGGGGACCCGCGCAGGAAGCGAAGCAG
CGACGGGAACCGGCGAAGGGACGGGGACCGGGACCCGGAGAGAGACCAGGAGAGGGACGGGAACCGCGAC
CGGAACCGGGACCGGGAGAGGGAGAGAGAGAGGGAAAGAGACCCGGACCGAGGCCCCCGCCGGGACACAC
ACAGGGACGCGGGCCCTCGCGCAGTGAACCCCCTTCGGAGAGATATCTGCCCTCGACCCCCAGGCCTGGA
CGAGAGGAGGTGGAATATTACCAGTCAGAGGCGGAAGGACTCCTGGAATGCCACAAATGCAAATACTTGT
GCACTGGGAGAGGTGTGGTGCAGATAG

Translation (148 aa):
MEDPSGAREPRARPRERDPGRRPHPDQGRTHDRPRDRPGDPRRKRSSDGNRRRDGDRDPERDQERDGNRD
RNRDRERERERERDPDRGPRRDTHRDAGPRAVNPLRRDICPRPPGLDERRWNITSQRRKDSWNATNANTC
ALGEVWCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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