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Report for CCDS59085.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59085.1 Public Homo sapiens 7 LUC7L2 24 110 108 CCDS HistoryNCBI Gene:51631Re-query CCDS DB by CCDS ID:59085.1Re-query CCDS DB by GeneID:51631See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59085.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263545.7 ENSP00000263545.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000263545.7Link to Ensembl Protein Viewer:ENSP00000263545.7Re-query CCDS DB by Nucleotide ID:ENST00000263545Re-query CCDS DB by Protein ID:ENSP00000263545
Original member Current member EBI ENST00000541170.7 ENSP00000441604.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541170.7Link to Ensembl Protein Viewer:ENSP00000441604.1Re-query CCDS DB by Nucleotide ID:ENST00000541170Re-query CCDS DB by Protein ID:ENSP00000441604
Original member Current member NCBI NM_001244585.2 NP_001231514.1 Accepted alive Link to Nucleotide Sequence:NM_001244585.2Link to Protein Sequence:NP_001231514.1Re-query CCDS DB by Nucleotide ID:NM_001244585Re-query CCDS DB by Protein ID:NP_001231514Link to BLAST:NP_001231514.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231514.1 389 Q9Y383-3 389 100% 0 0

Chromosomal Locations for CCDS 59085.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 139371412 139371463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139376062 139376156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139398599 139398697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139402137 139402247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139405644 139405787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139407174 139407350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139409563 139409654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139412551 139412580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139417538 139417729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139422163 139422340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGGTCATCCACTCACAGCTTAAAAAAATACAGGGAGCATCGGAGAGAATGGGAGATACAACTCGTCAAC
GAATCAAATTCAGTGATGACAGAGTATGCAAGAGTCACCTTCTCAACTGTTGTCCTCATGATGTCCTTTC
TGGAACTAGAATGGATCTTGGAGAATGTCTGAAAGTCCATGACCTGGCTTTAAGAGCGGATTATGAAATT
GCATCCAAAGAACAAGATTTTTTCTTTGAACTTGATGCCATGGATCATCTGCAGTCATTCATTGCAGATT
GTGATCGTAGAACAGAAGTGGCCAAGAAAAGATTAGCAGAAACTCAAGAAGAGATTAGTGCTGAAGTAGC
AGCAAAGGCAGAACGTGTTCATGAGTTAAATGAAGAAATTGGTAAATTGTTAGCCAAGGTGGAACAACTA
GGAGCTGAAGGGAATGTGGAGGAATCCCAGAAAGTAATGGATGAAGTAGAGAAAGCACGGGCAAAGAAAA
GAGAAGCAGAGGAAGTTTATCGGAATTCTATGCCAGCTTCCAGTTTTCAGCAGCAGAAACTTCGAGTCTG
TGAAGTCTGCTCTGCCTATTTAGGACTTCATGATAATGACAGACGACTGGCTGATCATTTTGGGGGTAAA
CTGCACCTGGGATTTATTGAAATAAGAGAGAAGCTTGAAGAATTAAAGAGAGTCGTAGCTGAGAAGCAGG
AGAAAAGAAACCAGGAACGGCTGAAACGAAGAGAAGAGAGAGAGAGAGAAGAAAGGGAGAAGCTGAGGAG
GTCCCGATCACACAGCAAGAATCCAAAAAGATCCAGGTCCAGAGAGCATCGCAGACATCGATCTCGCTCC
ATGTCACGTGAACGCAAGAGGAGAACTCGATCCAAATCTCGGGAGAAACGCCATCGCCACAGGTCCCGCT
CCAGCAGCCGTAGCCGCAGCCGTAGCCACCAGAGAAGTCGGCACAGTTCTAGAGATAGGAGCAGAGAACG
ATCCAAGAGGAGATCCTCAAAAGAAAGATTCAGAGACCAAGACTTAGCATCATGTGACAGAGACAGGAGT
TCAAGAGACAGATCACCTCGTGACAGAGATCGGAAAGATAAGAAGCGGTCCTATGAGAGTGCTAATGGCA
GATCAGAAGACAGGAGGAGCTCTGAAGAGCGCGAAGCAGGGGAGATCTAA

Translation (389 aa):
MVIHSQLKKIQGASERMGDTTRQRIKFSDDRVCKSHLLNCCPHDVLSGTRMDLGECLKVHDLALRADYEI
ASKEQDFFFELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQL
GAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGK
LHLGFIEIREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRS
MSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRS
SRDRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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