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Report for CCDS59052.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59052.1 Public Homo sapiens 7 EPDR1 24 110 108 CCDS HistoryNCBI Gene:54749Re-query CCDS DB by CCDS ID:59052.1Re-query CCDS DB by GeneID:54749See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59052.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000425345.1 ENSP00000413359.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425345.1Link to Ensembl Protein Viewer:ENSP00000413359.1Re-query CCDS DB by Nucleotide ID:ENST00000425345Re-query CCDS DB by Protein ID:ENSP00000413359
Original member Current member NCBI NM_001242948.2 NP_001229877.1 Accepted alive Link to Nucleotide Sequence:NM_001242948.2Link to Protein Sequence:NP_001229877.1Re-query CCDS DB by Nucleotide ID:NM_001242948Re-query CCDS DB by Protein ID:NP_001229877Link to BLAST:NP_001229877.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229877.1 163 Q9UM22-3 163 100% 0 0

Chromosomal Locations for CCDS 59052.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 37921366 37921451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37948840 37949048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37950200 37950396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGGTCCGGGACTGGGAGGGGCGCTGCGCCCACCGAGGGCGGCCTGCTGGCGGGGGACTCAGTAACACCC
AGCGAGGCGGTGGCAGATTATTTGAATATATTTTGCTGTATAAGGATGGAGTGATGTTTCAGATTGACCA
AGCCACCAAGCAGTGCTCAAAGATGACCCTGACACAGCCCTGGGATCCTCTTGACATTCCTCAAAACTCC
ACCTTTGAAGACCAGTACTCCATCGGGGGGCCTCAGGAGCAGATCACCGTCCAGGAGTGGTCGGACAGAA
AGTCAGCTAGATCCTATGAAACCTGGATTGGCATCTATACAGTCAAGGATTGCTATCCTGTCCAGGAAAC
CTTTACCATAAACTACAGTGTGATATTGTCTACGCGGTTTTTTGACATCCAGCTGGGTATTAAAGACCCC
TCGGTGTTTACCCCTCCAAGCACGTGCCAGATGGCCCAACTGGAGAAGATGAGCGAAGACTGCTCCTGGT
GA

Translation (163 aa):
MVRDWEGRCAHRGRPAGGGLSNTQRGGGRLFEYILLYKDGVMFQIDQATKQCSKMTLTQPWDPLDIPQNS
TFEDQYSIGGPQEQITVQEWSDRKSARSYETWIGIYTVKDCYPVQETFTINYSVILSTRFFDIQLGIKDP
SVFTPPSTCQMAQLEKMSEDCSW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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