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Report for CCDS58945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58945.1 Public Homo sapiens 5 FYB1 24 110 108 CCDS HistoryNCBI Gene:2533Re-query CCDS DB by CCDS ID:58945.1Re-query CCDS DB by GeneID:2533See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58945.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000646045.2 ENSP00000493623.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646045.2Link to Ensembl Protein Viewer:ENSP00000493623.1Re-query CCDS DB by Nucleotide ID:ENST00000646045Re-query CCDS DB by Protein ID:ENSP00000493623
Original member Current member NCBI NM_001243093.2 NP_001230022.1 Accepted alive Link to Nucleotide Sequence:NM_001243093.2Link to Protein Sequence:NP_001230022.1Re-query CCDS DB by Nucleotide ID:NM_001243093Re-query CCDS DB by Protein ID:NP_001230022Link to BLAST:NP_001230022.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230022.1 839 O15117-3 839 100% 0 0

Chromosomal Locations for CCDS 58945.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 39107443 39107465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39108231 39108262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39110356 39110389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39118874 39119036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39119535 39119634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39122336 39122402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39124253 39124278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39125998 39126135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39127741 39127807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39130590 39130612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39134208 39134349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39134855 39135014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39137600 39137720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39138657 39138691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39139233 39139252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39141095 39141141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39153448 39153604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39201826 39202987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 39270569 39270571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2520 nt):
ATGGATGGAAAGGCAGATGTAAAGTCCCTCATGGCGAAATATAACACGGGGGGCAACCCGACAGAGGATG
TCTCAGTCAATAGCCGACCCTTCAGAGTCACAGGGCCAAACTCATCTTCAGGAATACAAGCAAGAAAGAA
CTTATTCAACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAGCAATGTACCTAAGTTTGGGTCCCCA
AAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAA
AGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGT
GGGATTTCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCC
TGGCCTCCTGGAAACAAGCCATCTCTTCACAGTGTAAACCAAGACCATGACTTAAAGCCACTAGGCCCGA
AATCTGGGCCTACTCCTCCAACCTCAGAAAATGAACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAA
AGGGAAATTTATGTCAGCATCACAAGATCTTGAACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCAG
AAGCCGCCCCTAAGTACCGAGAACTCCCATGAAGACGAAAGCCCCATGAAGAATGTGTCTTCATCAAAAG
GGTCCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCCCTTTAAAACCAGCAAGGGAAGACTCAGAAAA
TAAAGACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCTGGAGTGGTTTTGAAACCTGCTGCGAGCAGG
GGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAAAAAGGAAGATAGGAAGATAGATGCTGCTAAGAACA
CCTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTCAGGGACTCCTCCTGCCAGGTTCCCTAAGGCCCC
TTCTAAGCTGACAGTGGGGGGGCCATGGGGCCAAAGTCAGGAAAAGGAAAAGGGAGACAAGAATTCAGCC
ACCCCGAAACAGAAGCCATTGCCTCCCTTGTTTACCTTGGGTCCACCTCCACCAAAACCCAACAGACCAC
CAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTGGAAACAGTACTAGCAAAGGCCAGACGTCTTA
CTCAACAACTTCCCTGCCACCACCTCCACCATCCCATCCGGCCAGCCAACCACCATTGCCAGCATCTCAC
CCATCACAACCACCAGTCCCAAGCCTACCTCCCAGAAACATTAAACCTCCGTTTGACCTAAAAAGCCCTG
TCAATGAAGACAATCAAGATGGTGTCACGCACTCTGATGGTGCTGGAAATCTAGATGAGGAACAAGACAG
TGAAGGAGAAACATATGAAGACATAGAAGCATCCAAAGAAAGAGAGAAGAAAAGGGAAAAGGAAGAAAAG
AAGAGGTTAGAGCTGGAGAAAAAGGAACAGAAAGAGAAAGAAAAGAAAGAACAAGAAATAAAGAAGAAAT
TTAAACTAACAGGCCCTATTCAAGTCATCCATCTTGCAAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAA
TGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGAAAATGG
TTGGGCAGAACAGCAAGGGGTTCATATGGCTATATTAAAACAACTGCTGTAGAGATTGACTATGATTCTT
TGAAACTGAAAAAAGACTCTCTTGGTGCCCCTTCAAGACCTATTGAAGATGACCAAGAAGTATATGATGA
TGTTGCAGAGCAGGATGATATTAGCAGCCACAGTCAGAGTGGAAGTGGAGGGATATTCCCTCCACCACCA
GATGATGACATTTATGATGGGATTGAAGAGGAAGATGCTGATGATGGCTCCACACTACAGGTTCAAGAGA
AGAGTAATACGTGGTCCTGGGGGATTTTGAAGATGTTAAAGGGAAAAGATGACAGAAAGAAAAGTATACG
AGAGAAACCTAAAGTCTCTGACTCAGACAATAATGAAGGTTCATCTTTCCCTGCTCCTCCTAAACAATTG
GACATGGGAGATGAAGTTTACGATGATGTGGATACCTCTGATTTCCCTGTTTCATCAGCAGAGATGAGTC
AAGGAACTAATGTTGGAAAAGCTAAGACAGAAGAAAAGGACCTTAAGAAGCTAAAAAAGCAGGAAAAAGA
AGAAAAAGACTTCAGGAAAAAATTTAAATATGATGGTGAAATTAGAGTCCTATATTCAACTAAAGTTACA
ACTTCCATAACTTCTAAAAAGTGGGGAACCAGAGATCTACAGGTAAAACCTGGTGAATCTCTAGAAGTTA
TACAAACCACAGATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGAAATATGGTTATGTCCTTCGGAG
TTACCTAGCGGACAATGATGGAGAGATCTATGATGATATTGCTGATGGCTGCATCTATGACAATGACTAG

Translation (839 aa):
MDGKADVKSLMAKYNTGGNPTEDVSVNSRPFRVTGPNSSSGIQARKNLFNNQGNASPPAGPSNVPKFGSP
KPPVAVKPSSEEKPDKEPKPPFLKPTGAGQRFGTPASLTTRDPEAKVGFLKPVGPKPINLPKEDSKPTFP
WPPGNKPSLHSVNQDHDLKPLGPKSGPTPPTSENEQKQAFPKLTGVKGKFMSASQDLEPKPLFPKPAFGQ
KPPLSTENSHEDESPMKNVSSSKGSPAPLGVRSKSGPLKPAREDSENKDHAGEISSLPFPGVVLKPAASR
GGPGLSKNGEEKKEDRKIDAAKNTFQSKINQEELASGTPPARFPKAPSKLTVGGPWGQSQEKEKGDKNSA
TPKQKPLPPLFTLGPPPPKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPPLPASH
PSQPPVPSLPPRNIKPPFDLKSPVNEDNQDGVTHSDGAGNLDEEQDSEGETYEDIEASKEREKKREKEEK
KRLELEKKEQKEKEKKEQEIKKKFKLTGPIQVIHLAKACCDVKGGKNELSFKQGEQIEIIRITDNPEGKW
LGRTARGSYGYIKTTAVEIDYDSLKLKKDSLGAPSRPIEDDQEVYDDVAEQDDISSHSQSGSGGIFPPPP
DDDIYDGIEEEDADDGSTLQVQEKSNTWSWGILKMLKGKDDRKKSIREKPKVSDSDNNEGSSFPAPPKQL
DMGDEVYDDVDTSDFPVSSAEMSQGTNVGKAKTEEKDLKKLKKQEKEEKDFRKKFKYDGEIRVLYSTKVT
TSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADNDGEIYDDIADGCIYDND


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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