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Report for CCDS58743.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58743.1 Public Homo sapiens 2 GULP1 24 110 108 CCDS HistoryNCBI Gene:51454Re-query CCDS DB by CCDS ID:58743.1Re-query CCDS DB by GeneID:51454See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58743.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409805.5 ENSP00000387171.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409805.5Link to Ensembl Protein Viewer:ENSP00000387171.1Re-query CCDS DB by Nucleotide ID:ENST00000409805Re-query CCDS DB by Protein ID:ENSP00000387171
Original member Current member NCBI NM_001252669.2 NP_001239598.1 Accepted alive Link to Nucleotide Sequence:NM_001252669.2Link to Protein Sequence:NP_001239598.1Re-query CCDS DB by Nucleotide ID:NM_001252669Re-query CCDS DB by Protein ID:NP_001239598Link to BLAST:NP_001239598.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001239598.1 201 Q9UBP9-3 201 100% 0 0

Chromosomal Locations for CCDS 58743.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 188477703 188477730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188483431 188483492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188569239 188569355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188570028 188570120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188584265 188584403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188587855 188587949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 188593940 188594011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGAACCGTGCTTTTAGCAGGAAGAAAGACAAAACATGGATGCATACACCTGAAGCTTTATCAAAACATT
TCATTCCCTATAATGCAAAGGCTGAAGAGATCACTTTAACAATTGGCCAAGCATTTGACCTGGCATACAG
GAAATTTCTAGAATCAGGAGGAAAAGATGTTGAAACAAGAAAACAGATCGCAGGGTTACAAAAAAGAATC
CAAGACTTAGAAACAGAAAATATGGAACTTAAAAATAAAGTACAAGATTTGGAAAACCAACTGAGAATAA
CTCAAGTATCAGCACCTCCAGCAGGCAGTATGACACCTAAGTCGCCCTCCACTGACATCTTTGATATGAT
TCCATTTTCTCCAATATCACACCAGTCTTCGATGCCTACTCGCAATGGCACACAGCCACCTCCAGTACCT
AGTAGATCTACTGAGATTAAACGGGACCTGTTTGGAGCAGAACCTTTTGACCCATTTAACTGTGGAGCAG
CAGATTTCCCTCCAGATATTCAATCAAAATTAGATGAGATGCAGGAGGGGTTCAAAATGGGACTAACTCT
TGAAGGCACAGTATTTTGTCTCGACCCGTTAGACAGTAGGTGCTGA

Translation (201 aa):
MNRAFSRKKDKTWMHTPEALSKHFIPYNAKAEEITLTIGQAFDLAYRKFLESGGKDVETRKQIAGLQKRI
QDLETENMELKNKVQDLENQLRITQVSAPPAGSMTPKSPSTDIFDMIPFSPISHQSSMPTRNGTQPPPVP
SRSTEIKRDLFGAEPFDPFNCGAADFPPDIQSKLDEMQEGFKMGLTLEGTVFCLDPLDSRC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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