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Report for CCDS58680.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58680.1 Public Homo sapiens 19 DNAAF3 24 110 108 CCDS HistoryNCBI Gene:352909Re-query CCDS DB by CCDS ID:58680.1Re-query CCDS DB by GeneID:352909See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58680.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000527223.6 ENSP00000436975.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527223.6Link to Ensembl Protein Viewer:ENSP00000436975.2Re-query CCDS DB by Nucleotide ID:ENST00000527223Re-query CCDS DB by Protein ID:ENSP00000436975
Original member Current member NCBI NM_001256714.1 NP_001243643.1 Accepted alive Link to Nucleotide Sequence:NM_001256714.1Link to Protein Sequence:NP_001243643.1Re-query CCDS DB by Nucleotide ID:NM_001256714Re-query CCDS DB by Protein ID:NP_001243643Link to BLAST:NP_001243643.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243643.1 608 Q8N9W5-3 608 100% 0 0

Chromosomal Locations for CCDS 58680.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55159062 55159449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55159533 55159607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55159899 55160010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55160640 55160775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161065 55161187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161293 55161418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161643 55161825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55162133 55162290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55165370 55165463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55165858 55166063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55166329 55166417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55166512 55166648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1827 nt):
ATGCTTCCATTGCTTGATTCCTCGAAAAGGGCGGGGACTCTGGGCAGCGGTTGTGGAGTGCCGCGGGTCC
ACAGTGCTGCACTGAGCAGAGAGGAAGGGGCGTCCCGGGATATTTGGAGGATAAAGGTGTGGGCAAGGGT
GATGACCACACCTGCCGGCTCCGGCAGCGGCTTCGGCTCCGTGTCCTGGTGGGGCCTGTCCCCGGCGCTG
GACCTGCAGGCTGAAAGGGATGCTACGGTGGACGCTCTGCCAACCACCATGGTGCCCCAGCCAGCTGTCA
TCTTGCCAGGTCCTCCTGTGGACCCAGACTCCCAGGCCGATACAGTGCACAGCAACCCCGAGCTAGATGT
GCTGCTTCTGGGCTCTGTGGATGGACGGCACCTGCTGCGGACCCTGTCCCGAGCGAAGTTCTGGCCTCGC
AGGAGGTTCAACTTCTTTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCC
TAGCCCTGGAGGAACCGGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGGGAA
CGCGCTGCTGCGCCCGCCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCC
GAGCCCGACCGCCTGGAGGAACAGCTGCCCTGGCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGATG
CCCTGGAGGCCGTATTCCGCTTCTGGGCTGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAGCCGCCT
CTGGGACTCGCGCCTGCGCCACTACCTGGGCTCCCGCTACGACGCCCGGCGCGGTGTCAGCGACTGGGAC
CTGCGCATGAAGCTGCATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGTTCCGACGCTGGCGGGACA
CAGGCGTCGCCTTTGAACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGTCCGGTCG
CCTCCTGAGCTACCGTGGGGAGCGCGTGGCAGCGCGCGGGTACTGGGGGGACATCGCCACGGGGCCCTTC
GTGGCCTTCGGCATCGAAGCGGACGACGAGAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGG
CCGGGGAGATCACTCAACACAACGTGACGGAGCTGCTCCGCGACGTGGCCGCCTGGGGGCGCGCGAGAGC
CACCGGGGGGGACCTGGAGGAGCAGCAGCACGCGGAGGGAAGCCCGGAGCCAGGGACTCCAGCCCCGACC
CCGGAATCTTTCACCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAAGAGCTGCTACA
ACGGCCGATTCCAGCTCCTCTATGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGAGCTTGGGGCCTG
TGTGGCACCCGGAGGGAACTTGATTGTGGAATTAGCCCGGTACCTGGTGGACGTGCGGCAGGAGCAGCTG
CAGGGATTCAACACCCGGGTCAGGGAGCTAGCTCAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGGC
CTTCAGAGACCTTCGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGA
ACCCGGAACTCCGCCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTG
ACCCAGCCTCTGCAGGGTGGGACCCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTCTCCAGGTTCAC
TCTCAGAGGTTCTGGCTCAGCCTCAGGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTCCAAAACTGG
AGTCTGA

Translation (608 aa):
MLPLLDSSKRAGTLGSGCGVPRVHSAALSREEGASRDIWRIKVWARVMTTPAGSGSGFGSVSWWGLSPAL
DLQAERDATVDALPTTMVPQPAVILPGPPVDPDSQADTVHSNPELDVLLLGSVDGRHLLRTLSRAKFWPR
RRFNFFVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLEVWGNALLRPPVAAFVRAQADLLAHLVP
EPDRLEEQLPWLSLRALKFRERDALEAVFRFWAGGEKGPQAFPMSRLWDSRLRHYLGSRYDARRGVSDWD
LRMKLHDRGAQVIHPQEFRRWRDTGVAFELRDSSAYHVPNRTLASGRLLSYRGERVAARGYWGDIATGPF
VAFGIEADDESLLRTSNGQPVKTAGEITQHNVTELLRDVAAWGRARATGGDLEEQQHAEGSPEPGTPAPT
PESFTVHFLPLNSAQTLHHKSCYNGRFQLLYVACGMVHLLIPELGACVAPGGNLIVELARYLVDVRQEQL
QGFNTRVRELAQAAGFAPQTGARPSETFARFCKSQESALGNTVPAVEPGTPPLDILAQPLEASNPALEGL
TQPLQGGTPHCEPCQLPSESPGSLSEVLAQPQGALAPPNCESDSKTGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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