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Report for CCDS58676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58676.1 Public Homo sapiens 19 C19orf84 24 110 108 CCDS HistoryNCBI Gene:147646Re-query CCDS DB by CCDS ID:58676.1Re-query CCDS DB by GeneID:147646See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58676.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574814.2 ENSP00000458772.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000574814.2Link to Ensembl Protein Viewer:ENSP00000458772.1Re-query CCDS DB by Nucleotide ID:ENST00000574814Re-query CCDS DB by Protein ID:ENSP00000458772
Original member Current member NCBI NM_001193623.2 NP_001180552.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001193623.2Link to Protein Sequence:NP_001180552.1Re-query CCDS DB by Nucleotide ID:NM_001193623Re-query CCDS DB by Protein ID:NP_001180552Link to BLAST:NP_001180552.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180552.1 186 I3L1E1 186 100% 0 0

Chromosomal Locations for CCDS 58676.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51388984 51389509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51390478 51390512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGGAACAACCAAAGGACGGGGCTGGGCCTGAAGGGAACAACCTGTCCCTGCCGTCATCTGGGACCGAGC
CATGGCCCCCTGCGCCTCTCCCAGCCCCTCCACCCTTGCTCCTGAACTCCACAGACCCCACCCACCTGGG
GCTCCCGGAGAGCGTGGCCTCTGTCACCGTGCCCATACGCCTGGACACCCTCTCCTGCCTCCTGCACAGC
GCCCTGCTGGGGGCCTACACCTTCCAACAGGCCTTGCCCTCTTGCCCCTGCTGCTCCCAGGCAGGCCACT
CCCAGCCGGGGGCAGTTAGGAGGCCTCCCAGGGGACGCGGAGGCTGGGAAGTCAGGCACAGGCCAGGCTG
GGGCCGAGGCCTGCATCGACGGGGCCTTGGGAGAGCTGAGCAGCCAGAGAGGGGCCGGGCGGGGGGCCCT
GGGGCTGGCCCCAGGACCCCACCAATGACACTGCCATCACCACCAACACTGCCTGCCCAGGATGGGAAGA
AAGAAGCTCGAGGTCCAGAGCCACCCCTGGAAACACCACTGGCTGCTGAGGACTGGGAGACAGAGTACTA
G

Translation (186 aa):
MEQPKDGAGPEGNNLSLPSSGTEPWPPAPLPAPPPLLLNSTDPTHLGLPESVASVTVPIRLDTLSCLLHS
ALLGAYTFQQALPSCPCCSQAGHSQPGAVRRPPRGRGGWEVRHRPGWGRGLHRRGLGRAEQPERGRAGGP
GAGPRTPPMTLPSPPTLPAQDGKKEARGPEPPLETPLAAEDWETEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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