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Report for CCDS5865.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5865.1 Public Homo sapiens 7 AGK 24 110 108 CCDS HistoryNCBI Gene:55750Re-query CCDS DB by CCDS ID:5865.1Re-query CCDS DB by GeneID:55750See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5865.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650547.1 ENSP00000496789.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650547.1Link to Ensembl Protein Viewer:ENSP00000496789.1Re-query CCDS DB by Nucleotide ID:ENST00000650547Re-query CCDS DB by Protein ID:ENSP00000496789
Original member Current member EBI ENST00000649286.2 ENSP00000497280.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000649286.2Link to Ensembl Protein Viewer:ENSP00000497280.1Re-query CCDS DB by Nucleotide ID:ENST00000649286Re-query CCDS DB by Protein ID:ENSP00000497280
Original member Current member EBI ENST00000648068.1 ENSP00000498112.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648068.1Link to Ensembl Protein Viewer:ENSP00000498112.1Re-query CCDS DB by Nucleotide ID:ENST00000648068Re-query CCDS DB by Protein ID:ENSP00000498112
Original member Current member NCBI NM_018238.4 NP_060708.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018238.4Link to Protein Sequence:NP_060708.1Re-query CCDS DB by Nucleotide ID:NM_018238Re-query CCDS DB by Protein ID:NP_060708Link to BLAST:NP_060708.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060708.1 422 Q53H12-1 422 100% 0 0

Chromosomal Locations for CCDS 5865.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 141555467 141555567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141593146 141593185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141596562 141596641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141601205 141601280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141611195 141611287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141614146 141614178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141615471 141615565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141621732 141621801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141633901 141633980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141636960 141637017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141641248 141641398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141641811 141641908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141649263 141649333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141651525 141651609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 141652787 141652924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGACGGTGTTCTTTAAAACGCTTCGAAATCACTGGAAGAAAACTACAGCTGGGCTCTGCCTGCTGACCT
GGGGAGGCCATTGGCTCTATGGAAAACACTGTGATAACCTCCTAAGGAGAGCAGCCTGTCAAGAAGCTCA
GGTGTTTGGCAATCAACTCATTCCTCCCAATGCACAAGTGAAGAAGGCCACTGTTTTTCTCAATCCTGCA
GCTTGCAAAGGAAAAGCCAGGACTCTATTTGAAAAAAATGCTGCCCCGATTTTACATTTATCTGGCATGG
ATGTGACTATTGTTAAGACAGATTATGAGGGACAAGCCAAGAAACTCCTGGAACTGATGGAAAACACGGA
TGTGATCATTGTTGCAGGAGGAGATGGGACACTGCAGGAGGTTGTTACTGGTGTTCTTCGACGAACAGAT
GAGGCTACCTTCAGTAAGATTCCCATTGGATTTATCCCACTGGGAGAGACCAGTAGTTTGAGTCATACCC
TCTTTGCCGAAAGTGGAAACAAAGTCCAACATATTACTGATGCCACACTTGCCATTGTGAAAGGAGAGAC
AGTTCCACTTGATGTCTTGCAGATCAAGGGTGAAAAGGAACAGCCTGTATTTGCAATGACCGGCCTTCGA
TGGGGATCTTTCAGAGATGCTGGCGTCAAAGTTAGCAAGTACTGGTATCTTGGGCCTCTAAAAATCAAAG
CAGCCCACTTTTTCAGCACTCTTAAGGAGTGGCCTCAGACTCATCAAGCCTCTATCTCATACACGGGACC
TACAGAGAGACCTCCCAATGAACCAGAGGAGACCCCTGTACAAAGGCCTTCTTTGTACAGGAGAATATTA
CGAAGGCTTGCGTCCTACTGGGCACAACCACAGGATGCCCTTTCCCAAGAGGTGAGCCCGGAGGTCTGGA
AAGATGTGCAGCTGTCCACCATTGAACTGTCCATCACAACACGGAATAATCAGCTTGACCCGACAAGCAA
AGAAGATTTTCTGAATATCTGCATTGAACCTGACACCATCAGCAAAGGAGACTTTATAACTATAGGAAGT
CGAAAGGTGAGAAACCCCAAGCTGCACGTGGAGGGCACGGAGTGTCTCCAAGCCAGCCAGTGCACTTTGC
TTATCCCGGAGGGAGCAGGGGGCTCTTTTAGCATTGACAGTGAGGAGTATGAAGCGATGCCTGTGGAGGT
GAAACTGCTCCCCAGGAAGCTGCAGTTCTTCTGTGATCCTAGGAAGAGAGAACAGATGCTCACAAGCCCC
ACCCAGTGA

Translation (422 aa):
MTVFFKTLRNHWKKTTAGLCLLTWGGHWLYGKHCDNLLRRAACQEAQVFGNQLIPPNAQVKKATVFLNPA
ACKGKARTLFEKNAAPILHLSGMDVTIVKTDYEGQAKKLLELMENTDVIIVAGGDGTLQEVVTGVLRRTD
EATFSKIPIGFIPLGETSSLSHTLFAESGNKVQHITDATLAIVKGETVPLDVLQIKGEKEQPVFAMTGLR
WGSFRDAGVKVSKYWYLGPLKIKAAHFFSTLKEWPQTHQASISYTGPTERPPNEPEETPVQRPSLYRRIL
RRLASYWAQPQDALSQEVSPEVWKDVQLSTIELSITTRNNQLDPTSKEDFLNICIEPDTISKGDFITIGS
RKVRNPKLHVEGTECLQASQCTLLIPEGAGGSFSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLTSP
TQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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